G::SystemsBiology

Serizawa

Summary Included libraries Package variables Synopsis Description General documentation Methods
Summary
G::Ecell::Serizawa - Perl extension for blah blah blah
Package variables top
Globals (from use vars definitions)
@EXPORT
$VERSION
@EXPORT_OK
Included modulestop
File::Basename
G::Messenger
SubOpt
strict
Inherit top
AutoLoader Exporter
Synopsistop
  use G::Ecell::Serizawa;
  blah blah blah
Descriptiontop
Stub documentation for G::Ecell::Serizawa was created by h2xs. It looks like the
author of the extension was negligent enough to leave the stub
unedited.

Blah blah blah.
Methodstop
DESTROYNo descriptionCode
ecellNo descriptionCode
er2eriNo descriptionCode
newNo descriptionCode
ss2erNo descriptionCode

Methods description

Methods code

DESTROYdescriptiontopprevnext
sub DESTROY {
    my $self = shift;
}
ecelldescriptiontopprevnext
sub ecell {
    my @args = opt_get(@_);
    my $gb = shift @args;
    my $r = opt_val("r");
    if (length $r){
	system("ecell -r $r &");
    }else{
	system("ecell &");
    }
}
er2eridescriptiontopprevnext
sub er2eri {
    my $infile = shift;
    my ($base, $dir, $ext) = fileparse($infile, '\..*');

    system('er2eri ' . $infile . ' > ' . $dir . $base . '.eri');

    return $dir . $base . '.eri';
}
newdescriptiontopprevnext
sub new {
    my $pkg = shift;
    my $filename = shift;
    my $option = shift;
    my $this;
    return $this;
}
ss2erdescriptiontopprevnext
sub ss2er {
    my $infile = shift;
    my ($base, $dir, $ext) = fileparse($infile, '\..*');

    system('ss2er < ' . $infile . ' > ' . $dir . $base . '.er');

    return $dir . $base . '.er';
}

General documentation

AUTHOR top
Seira Nakamura, gaou@g-language.org
SEE ALSO top
perl(1).