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biomobyjapanese [2008/04/14 06:58]
gaou
biomobyjapanese [2008/04/14 07:32]
gaou
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 例えばKEGG関連のウェブサービスなら、 例えばKEGG関連のウェブサービスなら、
  
 +<​code>​
   G > help -w kegg   G > help -w kegg
       Found keyword "​kegg"​ in the following web services (13 hits).       Found keyword "​kegg"​ in the following web services (13 hits).
   ​   ​
-      ​RINGStest ​                              ​  ​Testing the query for a KEGG Glycan ID given a KCF... + RINGStest ​                         : Testing the query for a KEGG Glycan ID given a KCF... 
-      convertIdentifier2KeggID ​                 ​This service consumes an identifier from the follo... + ​convertIdentifier2KeggID ​          ​: This service consumes an identifier from the follo... 
-      convertKeggGeneId2PDBId ​                ​  ​This service consumes an identifier under the KEGG... + ​convertKeggGeneId2PDBId ​           : This service consumes an identifier under the KEGG... 
-      convertKeggGeneId2ProtId ​                 ​This service consumes an identifier under the KEGG... + ​convertKeggGeneId2ProtId ​          ​: This service consumes an identifier under the KEGG... 
-      getColoredKeggPathwayOfKeggIds ​           ​This service takes as input a KEGG pathway and KEG... + ​getColoredKeggPathwayOfKeggIds ​    ​: This service takes as input a KEGG pathway and KEG... 
-      ​getKeggCompoundsOnKeggPathway ​            ​This service, given a KEGG pathway, searches for a... + getKeggCompoundsOnKeggPathway ​     : This service, given a KEGG pathway, searches for a... 
-      getKeggIdsByKeggPathway ​                ​  ​This service, given a KEGG pathway, searches for a... + ​getKeggIdsByKeggPathway ​           : This service, given a KEGG pathway, searches for a... 
-      getKeggPathwayAsGif ​                    ​  ​This service, given a KEGG pathway, returns a Gif ... + ​getKeggPathwayAsGif ​               : This service, given a KEGG pathway, returns a Gif ... 
-      getKeggPathwaysByKeggID ​                ​  ​This service, given a KEGG identifier, attempts to... + ​getKeggPathwaysByKeggID ​           : This service, given a KEGG identifier, attempts to... 
-      getPubChemSubstanceIdByKeggCompound ​    ​  ​This service, given a KEGG compound, returns the a... + ​getPubChemSubstanceIdByKeggCompound:​ This service, given a KEGG compound, returns the a... 
-      getUniprotDescriptorsByKeyword ​           ​Gets the uniprot identifier and description from a... + ​getUniprotDescriptorsByKeyword ​    ​: Gets the uniprot identifier and description from a... 
-      getUniprotIdentifierByGeneName ​           ​This service takes in a gene name, as an identifie... + ​getUniprotIdentifierByGeneName ​    ​: This service takes in a gene name, as an identifie... 
-      getUniprotIdentifiersByKeyword ​           ​Gets uniprot identifiers by keyword using the bfin...+ ​getUniprotIdentifiersByKeyword ​    ​: Gets uniprot identifiers by keyword using the bfin... 
 +</​code>​
  
 詳細を見るには、-wに続けてサービス名を入れます。 詳細を見るには、-wに続けてサービス名を入れます。
-  ​G > help -w getKeggPathwayAsGif+<​code>​ 
 +G > help -w getKeggPathwayAsGif
   ​   ​
-     Name: getKeggPathwayAsGif+   Name: getKeggPathwayAsGif
   ​   ​
-     Description:​+   Description:​
        This service, given a KEGG pathway, returns a Gif image of the pathway if it exists.        This service, given a KEGG pathway, returns a Gif image of the pathway if it exists.
        For example, the <Object, KEGG_PATHWAY,​ '​hsa00053'​)        For example, the <Object, KEGG_PATHWAY,​ '​hsa00053'​)
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   ​   ​
   ​   ​
-     Input:+   Input:
        ​pathway        ​pathway
                     Object: ​  ​Object                     Object: ​  ​Object
                  ​Namespace: ​  ​KEGG_PATHWAY                  ​Namespace: ​  ​KEGG_PATHWAY
   ​   ​
-     Output:+  ​Output:
        image        image
                     Object: ​  ​b64_encoded_gif                     Object: ​  ​b64_encoded_gif
                  ​Namespace:​                  ​Namespace:​
   ​   ​
-       Authority : bioinfo.icapture.ubc.ca +  ​Authority : bioinfo.icapture.ubc.ca 
-       ​Contact ​  : ekawas@mrl.ubc.ca +  Contact ​  : ekawas@mrl.ubc.ca 
-       ​Type      : Conversion +  Type      : Conversion 
-       ​Category ​ : moby +  Category ​ : moby 
-       ​URL       : http://​bioinfo.icapture.ubc.ca:​8090/​mobyservices/​services/​getKeggPathwayAsGif +  URL       : http://​bioinfo.icapture.ubc.ca:​8090/​mobyservices/​services/​getKeggPathwayAsGif 
-       ​LSID      :  urn:​lsid:​biomoby.org:​serviceinstance:​bioinfo.icapture.ubc.ca,​getKeggPathwayAsGif:​2007-12-03T19-38-05Z +  LSID      : urn:​lsid:​biomoby.org:​serviceinstance:​bioinfo.icapture.ubc.ca,​ 
 +              ​getKeggPathwayAsGif:​2007-12-03T19-38-05Z 
 +</​code>​
  
 実行するには、ws()を使います。 実行するには、ws()を使います。
biomobyjapanese.txt · Last modified: 2014/01/18 07:44 (external edit)