NC_008149: Yersinia pestis Nepal516

ori position (bp) ter position (bp) ori position (bp) ter position (bp)
GC-LowPass10 4532612 1962158 PURINE-LowPass10 4529291 1963265
GC-LowPass20 4532612 1962158 PURINE-LowPass20 4529291 1963265
GC-LowPass50 4532612 1962158 PURINE-LowPass50 4528184 1963265
GC-LowPass90 4533719 1959944 PURINE-LowPass90 4533719 1971014
GC-LowPass95 4533719 1964372 PURINE-LowPass95 4532612 1969907
GC-LowPass99 4533719 1966586 PURINE-LowPass99 4531505 1969907
KETO-LowPass10 4532612 1956623 GC ORITER 4533524 1962648
KETO-LowPass20 4532612 1956623 KETO ORITER 4532516 1957769
KETO-LowPass50 4532612 1956623 PURINE ORITER 4529497 1964088
KETO-LowPass90 4531505 1956623 INTER GC ORITER 4533524 1962648
KETO-LowPass95 4533719 1962158 INTER KETO ORITER 4532516 1957769
KETO-LowPass99 4533719 1962158 INTER PURINE ORITER 4529497 1964088
NORMGC GC ORITER 4533524 1962648 CAI GC ORITER 4533524 1969994
NORMGC KETO ORITER 4532516 1957769 CAI KETO ORITER 4532516 1969994
NORMGC PURINE ORITER 4529497 1964088 CAI PURINE ORITER 4529497 1949084



genomicskew.png
GC skew in GC3/non-coding/whole genome
Fourier power spectrum
Fourier Power Spectrum
Fourier power spectrum (1 to 50Hz)
Fourier Power Spectrum (1 to 50Hz)

gcwin-gc-1000.png
GC Content
window: 1000 bp
gcwin-gc-5000.png
GC Content
window: 5000 bp
gcwin-gc-10000.png
GC Content
window: 10000 bp
gcwin-at-1000.png
AT Content
window: 1000 bp
gcwin-at-5000.png
AT Content
window: 5000 bp
gcwin-at-10000.png
AT Content
window: 10000 bp

gcwin-keto-1000.png
Keto Content
window: 1000 bp
gcwin-keto-5000.png
Keto Content
window: 5000 bp
gcwin-keto-10000.png
Keto Content
window: 10000 bp
gcwin-purine-1000.png
Purine Content
window: 1000 bp
gcwin-purine-5000.png
Purine Content
window: 5000 bp
gcwin-purine-10000.png
Purine Content
window: 10000 bp

gcskew-gc-1000.png
GC Skew
window: 1000 bp
gcskew-gc-5000.png
GC Skew
window: 5000 bp
gcskew-gc-10000.png
GC Skew
window: 10000 bp
gcskew-at-1000.png
AT Skew
window: 1000 bp
gcskew-at-5000.png
AT Skew
window: 5000 bp
gcskew-at-10000.png
AT Skew
window: 10000 bp

gcskew-keto-1000.png
Keto Skew
window: 1000 bp
gcskew-keto-5000.png
Keto Skew
window: 5000 bp
gcskew-keto-10000.png
Keto Skew
window: 10000 bp
gcskew-purine-1000.png
Purine Skew
window: 1000 bp
gcskew-purine-5000.png
Purine Skew
window: 5000 bp
gcskew-purine-10000.png
Purine Skew
window: 10000 bp

cum_gcskew-gc-1000.png
GC Skew(cumulative)
window: 1000 bp
cum_gcskew-gc-5000.png
GC Skew(cumulative)
window: 5000 bp
cum_gcskew-gc-10000.png
GC Skew(cumulative)
window: 10000 bp
cum_gcskew-at-1000.png
AT Skew(cumulative)
window: 1000 bp
cum_gcskew-at-5000.png
AT Skew(cumulative)
window: 5000 bp
cum_gcskew-at-10000.png
AT Skew(cumulative)
window: 10000 bp

cum_gcskew-keto-1000.png
Keto Skew(cumulative)
window: 1000 bp
cum_gcskew-keto-5000.png
Keto Skew(cumulative)
window: 5000 bp
cum_gcskew-keto-10000.png
Keto Skew(cumulative)
window: 10000 bp
cum_gcskew-purine-1000.png
Purine Skew(cumulative)
window: 1000 bp
cum_gcskew-purine-5000.png
Purine Skew(cumulative)
window: 5000 bp
cum_gcskew-purine-10000.png
Purine Skew(cumulative)
window: 10000 bp





(C) 2006 Institute for Advanced Biosciences, Keio University