NC_008148: Rubrobacter xylanophilus DSM 9941

ori position (bp) ter position (bp) ori position (bp) ter position (bp)
GC-LowPass10 3223159 1453196 PURINE-LowPass10 3132654 1453196
GC-LowPass20 3223159 1453983 PURINE-LowPass20 3132654 1453983
GC-LowPass50 3223159 1452409 PURINE-LowPass50 3132654 1453196
GC-LowPass90 3223159 1453983 PURINE-LowPass90 3132654 1453983
GC-LowPass95 3223159 1456344 PURINE-LowPass95 3129506 1457131
GC-LowPass99 3222372 1461853 PURINE-LowPass99 3126358 1471297
KETO-LowPass10 3223159 1457131 GC ORITER 3224706 1452447
KETO-LowPass20 3223159 1448474 KETO ORITER 3224876 1449430
KETO-LowPass50 3223159 1448474 PURINE ORITER 3133607 1453505
KETO-LowPass90 3223159 1453983 INTER GC ORITER 3224706 1452447
KETO-LowPass95 3223159 1455557 INTER KETO ORITER 3224876 1449430
KETO-LowPass99 3223159 1449261 INTER PURINE ORITER 3133607 1453505
NORMGC GC ORITER 3224706 1452447 CAI GC ORITER 3132767 1452447
NORMGC KETO ORITER 3224876 1449430 CAI KETO ORITER 3224876 1449430
NORMGC PURINE ORITER 3133607 1453505 CAI PURINE ORITER 3133607 1453505



genomicskew.png
GC skew in GC3/non-coding/whole genome
Fourier power spectrum
Fourier Power Spectrum
Fourier power spectrum (1 to 50Hz)
Fourier Power Spectrum (1 to 50Hz)

gcwin-gc-1000.png
GC Content
window: 1000 bp
gcwin-gc-5000.png
GC Content
window: 5000 bp
gcwin-gc-10000.png
GC Content
window: 10000 bp
gcwin-at-1000.png
AT Content
window: 1000 bp
gcwin-at-5000.png
AT Content
window: 5000 bp
gcwin-at-10000.png
AT Content
window: 10000 bp

gcwin-keto-1000.png
Keto Content
window: 1000 bp
gcwin-keto-5000.png
Keto Content
window: 5000 bp
gcwin-keto-10000.png
Keto Content
window: 10000 bp
gcwin-purine-1000.png
Purine Content
window: 1000 bp
gcwin-purine-5000.png
Purine Content
window: 5000 bp
gcwin-purine-10000.png
Purine Content
window: 10000 bp

gcskew-gc-1000.png
GC Skew
window: 1000 bp
gcskew-gc-5000.png
GC Skew
window: 5000 bp
gcskew-gc-10000.png
GC Skew
window: 10000 bp
gcskew-at-1000.png
AT Skew
window: 1000 bp
gcskew-at-5000.png
AT Skew
window: 5000 bp
gcskew-at-10000.png
AT Skew
window: 10000 bp

gcskew-keto-1000.png
Keto Skew
window: 1000 bp
gcskew-keto-5000.png
Keto Skew
window: 5000 bp
gcskew-keto-10000.png
Keto Skew
window: 10000 bp
gcskew-purine-1000.png
Purine Skew
window: 1000 bp
gcskew-purine-5000.png
Purine Skew
window: 5000 bp
gcskew-purine-10000.png
Purine Skew
window: 10000 bp

cum_gcskew-gc-1000.png
GC Skew(cumulative)
window: 1000 bp
cum_gcskew-gc-5000.png
GC Skew(cumulative)
window: 5000 bp
cum_gcskew-gc-10000.png
GC Skew(cumulative)
window: 10000 bp
cum_gcskew-at-1000.png
AT Skew(cumulative)
window: 1000 bp
cum_gcskew-at-5000.png
AT Skew(cumulative)
window: 5000 bp
cum_gcskew-at-10000.png
AT Skew(cumulative)
window: 10000 bp

cum_gcskew-keto-1000.png
Keto Skew(cumulative)
window: 1000 bp
cum_gcskew-keto-5000.png
Keto Skew(cumulative)
window: 5000 bp
cum_gcskew-keto-10000.png
Keto Skew(cumulative)
window: 10000 bp
cum_gcskew-purine-1000.png
Purine Skew(cumulative)
window: 1000 bp
cum_gcskew-purine-5000.png
Purine Skew(cumulative)
window: 5000 bp
cum_gcskew-purine-10000.png
Purine Skew(cumulative)
window: 10000 bp





(C) 2006 Institute for Advanced Biosciences, Keio University