NC_008044: Silicibacter sp. TM1040

ori position (bp) ter position (bp) ori position (bp) ter position (bp)
GC-LowPass10 3029890 1375732 PURINE-LowPass10 3030671 1360893
GC-LowPass20 3029890 1375732 PURINE-LowPass20 3030671 1361674
GC-LowPass50 3030671 1375732 PURINE-LowPass50 3030671 1362455
GC-LowPass90 3029890 1370265 PURINE-LowPass90 3029890 1366360
GC-LowPass95 3022861 1368703 PURINE-LowPass95 3024423 1361674
GC-LowPass99 3012708 1361674 PURINE-LowPass99 3008803 1353864
KETO-LowPass10 3029890 1375732 GC ORITER 3030356 1375831
KETO-LowPass20 3029890 1375732 KETO ORITER 3030226 1376097
KETO-LowPass50 3029890 1376513 PURINE ORITER 3031386 1363347
KETO-LowPass90 3012708 1375732 INTER GC ORITER 3030356 1375831
KETO-LowPass95 3022080 1371827 INTER KETO ORITER 3030226 1376097
KETO-LowPass99 3015832 1376513 INTER PURINE ORITER 3031386 1363347
NORMGC GC ORITER 3031013 1375831 CAI GC ORITER 3015834 1375831
NORMGC KETO ORITER 3031015 1376097 CAI KETO ORITER 3028155 1376097
NORMGC PURINE ORITER 3031386 1363347 CAI PURINE ORITER 1 1373503



genomicskew.png
GC skew in GC3/non-coding/whole genome
Fourier power spectrum
Fourier Power Spectrum
Fourier power spectrum (1 to 50Hz)
Fourier Power Spectrum (1 to 50Hz)

gcwin-gc-1000.png
GC Content
window: 1000 bp
gcwin-gc-5000.png
GC Content
window: 5000 bp
gcwin-gc-10000.png
GC Content
window: 10000 bp
gcwin-at-1000.png
AT Content
window: 1000 bp
gcwin-at-5000.png
AT Content
window: 5000 bp
gcwin-at-10000.png
AT Content
window: 10000 bp

gcwin-keto-1000.png
Keto Content
window: 1000 bp
gcwin-keto-5000.png
Keto Content
window: 5000 bp
gcwin-keto-10000.png
Keto Content
window: 10000 bp
gcwin-purine-1000.png
Purine Content
window: 1000 bp
gcwin-purine-5000.png
Purine Content
window: 5000 bp
gcwin-purine-10000.png
Purine Content
window: 10000 bp

gcskew-gc-1000.png
GC Skew
window: 1000 bp
gcskew-gc-5000.png
GC Skew
window: 5000 bp
gcskew-gc-10000.png
GC Skew
window: 10000 bp
gcskew-at-1000.png
AT Skew
window: 1000 bp
gcskew-at-5000.png
AT Skew
window: 5000 bp
gcskew-at-10000.png
AT Skew
window: 10000 bp

gcskew-keto-1000.png
Keto Skew
window: 1000 bp
gcskew-keto-5000.png
Keto Skew
window: 5000 bp
gcskew-keto-10000.png
Keto Skew
window: 10000 bp
gcskew-purine-1000.png
Purine Skew
window: 1000 bp
gcskew-purine-5000.png
Purine Skew
window: 5000 bp
gcskew-purine-10000.png
Purine Skew
window: 10000 bp

cum_gcskew-gc-1000.png
GC Skew(cumulative)
window: 1000 bp
cum_gcskew-gc-5000.png
GC Skew(cumulative)
window: 5000 bp
cum_gcskew-gc-10000.png
GC Skew(cumulative)
window: 10000 bp
cum_gcskew-at-1000.png
AT Skew(cumulative)
window: 1000 bp
cum_gcskew-at-5000.png
AT Skew(cumulative)
window: 5000 bp
cum_gcskew-at-10000.png
AT Skew(cumulative)
window: 10000 bp

cum_gcskew-keto-1000.png
Keto Skew(cumulative)
window: 1000 bp
cum_gcskew-keto-5000.png
Keto Skew(cumulative)
window: 5000 bp
cum_gcskew-keto-10000.png
Keto Skew(cumulative)
window: 10000 bp
cum_gcskew-purine-1000.png
Purine Skew(cumulative)
window: 1000 bp
cum_gcskew-purine-5000.png
Purine Skew(cumulative)
window: 5000 bp
cum_gcskew-purine-10000.png
Purine Skew(cumulative)
window: 10000 bp





(C) 2006 Institute for Advanced Biosciences, Keio University