NC_008021: Streptococcus pyogenes MGAS9429

ori position (bp) ter position (bp) ori position (bp) ter position (bp)
GC-LowPass10 2016 968352 PURINE-LowPass10 224 968352
GC-LowPass20 2016 968352 PURINE-LowPass20 224 968352
GC-LowPass50 2016 968352 PURINE-LowPass50 224 968800
GC-LowPass90 672 967904 PURINE-LowPass90 224 969248
GC-LowPass95 224 966560 PURINE-LowPass95 224 965216
GC-LowPass99 224 964768 PURINE-LowPass99 224 969696
KETO-LowPass10 12768 980000 GC ORITER 2868 968906
KETO-LowPass20 12320 980000 KETO ORITER 12318 980088
KETO-LowPass50 12768 980000 PURINE ORITER 8 968564
KETO-LowPass90 11872 980000 INTER GC ORITER 2868 968906
KETO-LowPass95 10976 977312 INTER KETO ORITER 12318 980088
KETO-LowPass99 224 960288 INTER PURINE ORITER 8 968564
NORMGC GC ORITER 2868 968906 CAI GC ORITER 2868 968906
NORMGC KETO ORITER 3368 980088 CAI KETO ORITER 12318 980088
NORMGC PURINE ORITER 8 968564 CAI PURINE ORITER 8 968564



genomicskew.png
GC skew in GC3/non-coding/whole genome
Fourier power spectrum
Fourier Power Spectrum
Fourier power spectrum (1 to 50Hz)
Fourier Power Spectrum (1 to 50Hz)

gcwin-gc-1000.png
GC Content
window: 1000 bp
gcwin-gc-5000.png
GC Content
window: 5000 bp
gcwin-gc-10000.png
GC Content
window: 10000 bp
gcwin-at-1000.png
AT Content
window: 1000 bp
gcwin-at-5000.png
AT Content
window: 5000 bp
gcwin-at-10000.png
AT Content
window: 10000 bp

gcwin-keto-1000.png
Keto Content
window: 1000 bp
gcwin-keto-5000.png
Keto Content
window: 5000 bp
gcwin-keto-10000.png
Keto Content
window: 10000 bp
gcwin-purine-1000.png
Purine Content
window: 1000 bp
gcwin-purine-5000.png
Purine Content
window: 5000 bp
gcwin-purine-10000.png
Purine Content
window: 10000 bp

gcskew-gc-1000.png
GC Skew
window: 1000 bp
gcskew-gc-5000.png
GC Skew
window: 5000 bp
gcskew-gc-10000.png
GC Skew
window: 10000 bp
gcskew-at-1000.png
AT Skew
window: 1000 bp
gcskew-at-5000.png
AT Skew
window: 5000 bp
gcskew-at-10000.png
AT Skew
window: 10000 bp

gcskew-keto-1000.png
Keto Skew
window: 1000 bp
gcskew-keto-5000.png
Keto Skew
window: 5000 bp
gcskew-keto-10000.png
Keto Skew
window: 10000 bp
gcskew-purine-1000.png
Purine Skew
window: 1000 bp
gcskew-purine-5000.png
Purine Skew
window: 5000 bp
gcskew-purine-10000.png
Purine Skew
window: 10000 bp

cum_gcskew-gc-1000.png
GC Skew(cumulative)
window: 1000 bp
cum_gcskew-gc-5000.png
GC Skew(cumulative)
window: 5000 bp
cum_gcskew-gc-10000.png
GC Skew(cumulative)
window: 10000 bp
cum_gcskew-at-1000.png
AT Skew(cumulative)
window: 1000 bp
cum_gcskew-at-5000.png
AT Skew(cumulative)
window: 5000 bp
cum_gcskew-at-10000.png
AT Skew(cumulative)
window: 10000 bp

cum_gcskew-keto-1000.png
Keto Skew(cumulative)
window: 1000 bp
cum_gcskew-keto-5000.png
Keto Skew(cumulative)
window: 5000 bp
cum_gcskew-keto-10000.png
Keto Skew(cumulative)
window: 10000 bp
cum_gcskew-purine-1000.png
Purine Skew(cumulative)
window: 1000 bp
cum_gcskew-purine-5000.png
Purine Skew(cumulative)
window: 5000 bp
cum_gcskew-purine-10000.png
Purine Skew(cumulative)
window: 10000 bp





(C) 2006 Institute for Advanced Biosciences, Keio University