NC_007951: Burkholderia xenovorans LB400 chromosome 1

ori position (bp) ter position (bp) ori position (bp) ter position (bp)
GC-LowPass10 1793 2499343 PURINE-LowPass10 598 2532803
GC-LowPass20 1793 2499343 PURINE-LowPass20 598 2532803
GC-LowPass50 1793 2499343 PURINE-LowPass50 598 2532803
GC-LowPass90 598 2499343 PURINE-LowPass90 598 2533998
GC-LowPass95 598 2495758 PURINE-LowPass95 598 2530413
GC-LowPass99 598 2506513 PURINE-LowPass99 598 2562678
KETO-LowPass10 2988 2499343 GC ORITER 2516 2499675
KETO-LowPass20 2988 2499343 KETO ORITER 4163 2499550
KETO-LowPass50 2988 2499343 PURINE ORITER 507 2533427
KETO-LowPass90 18523 2494563 INTER GC ORITER 2516 2499675
KETO-LowPass95 17328 2494563 INTER KETO ORITER 4163 2499550
KETO-LowPass99 598 2496953 INTER PURINE ORITER 507 2533427
NORMGC GC ORITER 2516 2499675 CAI GC ORITER 2516 2499675
NORMGC KETO ORITER 4163 2499550 CAI KETO ORITER 4163 2499550
NORMGC PURINE ORITER 507 2533427 CAI PURINE ORITER 31561 2533427



genomicskew.png
GC skew in GC3/non-coding/whole genome
Fourier power spectrum
Fourier Power Spectrum
Fourier power spectrum (1 to 50Hz)
Fourier Power Spectrum (1 to 50Hz)

gcwin-gc-1000.png
GC Content
window: 1000 bp
gcwin-gc-5000.png
GC Content
window: 5000 bp
gcwin-gc-10000.png
GC Content
window: 10000 bp
gcwin-at-1000.png
AT Content
window: 1000 bp
gcwin-at-5000.png
AT Content
window: 5000 bp
gcwin-at-10000.png
AT Content
window: 10000 bp

gcwin-keto-1000.png
Keto Content
window: 1000 bp
gcwin-keto-5000.png
Keto Content
window: 5000 bp
gcwin-keto-10000.png
Keto Content
window: 10000 bp
gcwin-purine-1000.png
Purine Content
window: 1000 bp
gcwin-purine-5000.png
Purine Content
window: 5000 bp
gcwin-purine-10000.png
Purine Content
window: 10000 bp

gcskew-gc-1000.png
GC Skew
window: 1000 bp
gcskew-gc-5000.png
GC Skew
window: 5000 bp
gcskew-gc-10000.png
GC Skew
window: 10000 bp
gcskew-at-1000.png
AT Skew
window: 1000 bp
gcskew-at-5000.png
AT Skew
window: 5000 bp
gcskew-at-10000.png
AT Skew
window: 10000 bp

gcskew-keto-1000.png
Keto Skew
window: 1000 bp
gcskew-keto-5000.png
Keto Skew
window: 5000 bp
gcskew-keto-10000.png
Keto Skew
window: 10000 bp
gcskew-purine-1000.png
Purine Skew
window: 1000 bp
gcskew-purine-5000.png
Purine Skew
window: 5000 bp
gcskew-purine-10000.png
Purine Skew
window: 10000 bp

cum_gcskew-gc-1000.png
GC Skew(cumulative)
window: 1000 bp
cum_gcskew-gc-5000.png
GC Skew(cumulative)
window: 5000 bp
cum_gcskew-gc-10000.png
GC Skew(cumulative)
window: 10000 bp
cum_gcskew-at-1000.png
AT Skew(cumulative)
window: 1000 bp
cum_gcskew-at-5000.png
AT Skew(cumulative)
window: 5000 bp
cum_gcskew-at-10000.png
AT Skew(cumulative)
window: 10000 bp

cum_gcskew-keto-1000.png
Keto Skew(cumulative)
window: 1000 bp
cum_gcskew-keto-5000.png
Keto Skew(cumulative)
window: 5000 bp
cum_gcskew-keto-10000.png
Keto Skew(cumulative)
window: 10000 bp
cum_gcskew-purine-1000.png
Purine Skew(cumulative)
window: 1000 bp
cum_gcskew-purine-5000.png
Purine Skew(cumulative)
window: 5000 bp
cum_gcskew-purine-10000.png
Purine Skew(cumulative)
window: 10000 bp





(C) 2006 Institute for Advanced Biosciences, Keio University