NC_007925: Rhodopseudomonas palustris BisB18

ori position (bp) ter position (bp) ori position (bp) ter position (bp)
GC-LowPass10 5505813 2961873 PURINE-LowPass10 5480239 2959181
GC-LowPass20 5505813 2961873 PURINE-LowPass20 5480239 2963219
GC-LowPass50 5505813 2960527 PURINE-LowPass50 5478893 2961873
GC-LowPass90 5512543 2956489 PURINE-LowPass90 5482931 2964565
GC-LowPass95 5512543 2945721 PURINE-LowPass95 5488315 2959181
GC-LowPass99 5512543 2956489 PURINE-LowPass99 5512543 2934953
KETO-LowPass10 5512543 2940337 GC ORITER 5505727 2939508
KETO-LowPass20 5512543 2940337 KETO ORITER 5513833 2940634
KETO-LowPass50 5512543 2940337 PURINE ORITER 5481675 2960765
KETO-LowPass90 5512543 2940337 INTER GC ORITER 5505727 2939508
KETO-LowPass95 5512543 2930915 INTER KETO ORITER 5513833 2940634
KETO-LowPass99 5512543 2965911 INTER PURINE ORITER 5481675 2960765
NORMGC GC ORITER 5505727 2962053 CAI GC ORITER 5505727 2939508
NORMGC KETO ORITER 5513833 3010105 CAI KETO ORITER 5513833 3010105
NORMGC PURINE ORITER 5481675 2960765 CAI PURINE ORITER 5481675 2963897



genomicskew.png
GC skew in GC3/non-coding/whole genome
Fourier power spectrum
Fourier Power Spectrum
Fourier power spectrum (1 to 50Hz)
Fourier Power Spectrum (1 to 50Hz)

gcwin-gc-1000.png
GC Content
window: 1000 bp
gcwin-gc-5000.png
GC Content
window: 5000 bp
gcwin-gc-10000.png
GC Content
window: 10000 bp
gcwin-at-1000.png
AT Content
window: 1000 bp
gcwin-at-5000.png
AT Content
window: 5000 bp
gcwin-at-10000.png
AT Content
window: 10000 bp

gcwin-keto-1000.png
Keto Content
window: 1000 bp
gcwin-keto-5000.png
Keto Content
window: 5000 bp
gcwin-keto-10000.png
Keto Content
window: 10000 bp
gcwin-purine-1000.png
Purine Content
window: 1000 bp
gcwin-purine-5000.png
Purine Content
window: 5000 bp
gcwin-purine-10000.png
Purine Content
window: 10000 bp

gcskew-gc-1000.png
GC Skew
window: 1000 bp
gcskew-gc-5000.png
GC Skew
window: 5000 bp
gcskew-gc-10000.png
GC Skew
window: 10000 bp
gcskew-at-1000.png
AT Skew
window: 1000 bp
gcskew-at-5000.png
AT Skew
window: 5000 bp
gcskew-at-10000.png
AT Skew
window: 10000 bp

gcskew-keto-1000.png
Keto Skew
window: 1000 bp
gcskew-keto-5000.png
Keto Skew
window: 5000 bp
gcskew-keto-10000.png
Keto Skew
window: 10000 bp
gcskew-purine-1000.png
Purine Skew
window: 1000 bp
gcskew-purine-5000.png
Purine Skew
window: 5000 bp
gcskew-purine-10000.png
Purine Skew
window: 10000 bp

cum_gcskew-gc-1000.png
GC Skew(cumulative)
window: 1000 bp
cum_gcskew-gc-5000.png
GC Skew(cumulative)
window: 5000 bp
cum_gcskew-gc-10000.png
GC Skew(cumulative)
window: 10000 bp
cum_gcskew-at-1000.png
AT Skew(cumulative)
window: 1000 bp
cum_gcskew-at-5000.png
AT Skew(cumulative)
window: 5000 bp
cum_gcskew-at-10000.png
AT Skew(cumulative)
window: 10000 bp

cum_gcskew-keto-1000.png
Keto Skew(cumulative)
window: 1000 bp
cum_gcskew-keto-5000.png
Keto Skew(cumulative)
window: 5000 bp
cum_gcskew-keto-10000.png
Keto Skew(cumulative)
window: 10000 bp
cum_gcskew-purine-1000.png
Purine Skew(cumulative)
window: 1000 bp
cum_gcskew-purine-5000.png
Purine Skew(cumulative)
window: 5000 bp
cum_gcskew-purine-10000.png
Purine Skew(cumulative)
window: 10000 bp





(C) 2006 Institute for Advanced Biosciences, Keio University