NC_007794: Novosphingobium aromaticivorans DSM 12444

ori position (bp) ter position (bp) ori position (bp) ter position (bp)
GC-LowPass10 3550300 2032157 PURINE-LowPass10 92549 2033026
GC-LowPass20 3550300 2032157 PURINE-LowPass20 92549 2026943
GC-LowPass50 3551169 2032157 PURINE-LowPass50 92549 2026074
GC-LowPass90 3558990 2033026 PURINE-LowPass90 96894 2033026
GC-LowPass95 3558990 2031288 PURINE-LowPass95 96894 2033026
GC-LowPass99 3558990 2021729 PURINE-LowPass99 81252 2025205
KETO-LowPass10 3550300 2031288 GC ORITER 3551084 2032242
KETO-LowPass20 3550300 2031288 KETO ORITER 3551096 2032185
KETO-LowPass50 3551169 2032157 PURINE ORITER 92723 2033424
KETO-LowPass90 3557252 2033026 INTER GC ORITER 3551084 2032242
KETO-LowPass95 3558990 2030419 INTER KETO ORITER 3551096 2032185
KETO-LowPass99 3558990 2019991 INTER PURINE ORITER 92723 2033424
NORMGC GC ORITER 3551084 2032242 CAI GC ORITER 3551084 2032242
NORMGC KETO ORITER 3551096 2032185 CAI KETO ORITER 3551096 2032185
NORMGC PURINE ORITER 92723 2033424 CAI PURINE ORITER 92723 2039660



genomicskew.png
GC skew in GC3/non-coding/whole genome
Fourier power spectrum
Fourier Power Spectrum
Fourier power spectrum (1 to 50Hz)
Fourier Power Spectrum (1 to 50Hz)

gcwin-gc-1000.png
GC Content
window: 1000 bp
gcwin-gc-5000.png
GC Content
window: 5000 bp
gcwin-gc-10000.png
GC Content
window: 10000 bp
gcwin-at-1000.png
AT Content
window: 1000 bp
gcwin-at-5000.png
AT Content
window: 5000 bp
gcwin-at-10000.png
AT Content
window: 10000 bp

gcwin-keto-1000.png
Keto Content
window: 1000 bp
gcwin-keto-5000.png
Keto Content
window: 5000 bp
gcwin-keto-10000.png
Keto Content
window: 10000 bp
gcwin-purine-1000.png
Purine Content
window: 1000 bp
gcwin-purine-5000.png
Purine Content
window: 5000 bp
gcwin-purine-10000.png
Purine Content
window: 10000 bp

gcskew-gc-1000.png
GC Skew
window: 1000 bp
gcskew-gc-5000.png
GC Skew
window: 5000 bp
gcskew-gc-10000.png
GC Skew
window: 10000 bp
gcskew-at-1000.png
AT Skew
window: 1000 bp
gcskew-at-5000.png
AT Skew
window: 5000 bp
gcskew-at-10000.png
AT Skew
window: 10000 bp

gcskew-keto-1000.png
Keto Skew
window: 1000 bp
gcskew-keto-5000.png
Keto Skew
window: 5000 bp
gcskew-keto-10000.png
Keto Skew
window: 10000 bp
gcskew-purine-1000.png
Purine Skew
window: 1000 bp
gcskew-purine-5000.png
Purine Skew
window: 5000 bp
gcskew-purine-10000.png
Purine Skew
window: 10000 bp

cum_gcskew-gc-1000.png
GC Skew(cumulative)
window: 1000 bp
cum_gcskew-gc-5000.png
GC Skew(cumulative)
window: 5000 bp
cum_gcskew-gc-10000.png
GC Skew(cumulative)
window: 10000 bp
cum_gcskew-at-1000.png
AT Skew(cumulative)
window: 1000 bp
cum_gcskew-at-5000.png
AT Skew(cumulative)
window: 5000 bp
cum_gcskew-at-10000.png
AT Skew(cumulative)
window: 10000 bp

cum_gcskew-keto-1000.png
Keto Skew(cumulative)
window: 1000 bp
cum_gcskew-keto-5000.png
Keto Skew(cumulative)
window: 5000 bp
cum_gcskew-keto-10000.png
Keto Skew(cumulative)
window: 10000 bp
cum_gcskew-purine-1000.png
Purine Skew(cumulative)
window: 1000 bp
cum_gcskew-purine-5000.png
Purine Skew(cumulative)
window: 5000 bp
cum_gcskew-purine-10000.png
Purine Skew(cumulative)
window: 10000 bp





(C) 2006 Institute for Advanced Biosciences, Keio University