NC_007793: Staphylococcus aureus subsp. aureus USA300

ori position (bp) ter position (bp) ori position (bp) ter position (bp)
GC-LowPass10 2870946 1400248 PURINE-LowPass10 2870946 1431092
GC-LowPass20 2870946 1400248 PURINE-LowPass20 2870946 1431092
GC-LowPass50 2870946 1400248 PURINE-LowPass50 2870946 1431092
GC-LowPass90 2870946 1426886 PURINE-LowPass90 2870946 1428989
GC-LowPass95 2870946 1428288 PURINE-LowPass95 2870946 1429690
GC-LowPass99 2864637 1425484 PURINE-LowPass99 2863235 1408660
KETO-LowPass10 38906 2287714 GC ORITER 2872769 1424863
KETO-LowPass20 38906 2287714 KETO ORITER 39101 2288172
KETO-LowPass50 38906 2287714 PURINE ORITER 2872769 1431322
KETO-LowPass90 38205 2288415 INTER GC ORITER 2872769 1424863
KETO-LowPass95 34700 2291920 INTER KETO ORITER 39101 2288172
KETO-LowPass99 24185 2168544 INTER PURINE ORITER 2872769 1431322
NORMGC GC ORITER 2872769 1424863 CAI GC ORITER 297 1424863
NORMGC KETO ORITER 39101 2288172 CAI KETO ORITER 39101 2288172
NORMGC PURINE ORITER 2872769 1431322 CAI PURINE ORITER 2872769 1431322



genomicskew.png
GC skew in GC3/non-coding/whole genome
Fourier power spectrum
Fourier Power Spectrum
Fourier power spectrum (1 to 50Hz)
Fourier Power Spectrum (1 to 50Hz)

gcwin-gc-1000.png
GC Content
window: 1000 bp
gcwin-gc-5000.png
GC Content
window: 5000 bp
gcwin-gc-10000.png
GC Content
window: 10000 bp
gcwin-at-1000.png
AT Content
window: 1000 bp
gcwin-at-5000.png
AT Content
window: 5000 bp
gcwin-at-10000.png
AT Content
window: 10000 bp

gcwin-keto-1000.png
Keto Content
window: 1000 bp
gcwin-keto-5000.png
Keto Content
window: 5000 bp
gcwin-keto-10000.png
Keto Content
window: 10000 bp
gcwin-purine-1000.png
Purine Content
window: 1000 bp
gcwin-purine-5000.png
Purine Content
window: 5000 bp
gcwin-purine-10000.png
Purine Content
window: 10000 bp

gcskew-gc-1000.png
GC Skew
window: 1000 bp
gcskew-gc-5000.png
GC Skew
window: 5000 bp
gcskew-gc-10000.png
GC Skew
window: 10000 bp
gcskew-at-1000.png
AT Skew
window: 1000 bp
gcskew-at-5000.png
AT Skew
window: 5000 bp
gcskew-at-10000.png
AT Skew
window: 10000 bp

gcskew-keto-1000.png
Keto Skew
window: 1000 bp
gcskew-keto-5000.png
Keto Skew
window: 5000 bp
gcskew-keto-10000.png
Keto Skew
window: 10000 bp
gcskew-purine-1000.png
Purine Skew
window: 1000 bp
gcskew-purine-5000.png
Purine Skew
window: 5000 bp
gcskew-purine-10000.png
Purine Skew
window: 10000 bp

cum_gcskew-gc-1000.png
GC Skew(cumulative)
window: 1000 bp
cum_gcskew-gc-5000.png
GC Skew(cumulative)
window: 5000 bp
cum_gcskew-gc-10000.png
GC Skew(cumulative)
window: 10000 bp
cum_gcskew-at-1000.png
AT Skew(cumulative)
window: 1000 bp
cum_gcskew-at-5000.png
AT Skew(cumulative)
window: 5000 bp
cum_gcskew-at-10000.png
AT Skew(cumulative)
window: 10000 bp

cum_gcskew-keto-1000.png
Keto Skew(cumulative)
window: 1000 bp
cum_gcskew-keto-5000.png
Keto Skew(cumulative)
window: 5000 bp
cum_gcskew-keto-10000.png
Keto Skew(cumulative)
window: 10000 bp
cum_gcskew-purine-1000.png
Purine Skew(cumulative)
window: 1000 bp
cum_gcskew-purine-5000.png
Purine Skew(cumulative)
window: 5000 bp
cum_gcskew-purine-10000.png
Purine Skew(cumulative)
window: 10000 bp





(C) 2006 Institute for Advanced Biosciences, Keio University