NC_007761: Rhizobium etli CFN 42

ori position (bp) ter position (bp) ori position (bp) ter position (bp)
GC-LowPass10 4378090 2146018 PURINE-LowPass10 4337468 72158
GC-LowPass20 4378090 2146018 PURINE-LowPass20 4337468 72158
GC-LowPass50 4378090 2144949 PURINE-LowPass50 4337468 67882
GC-LowPass90 4378090 2146018 PURINE-LowPass90 4333192 73227
GC-LowPass95 4378090 2146018 PURINE-LowPass95 4241258 74296
GC-LowPass99 4378090 2165260 PURINE-LowPass99 4308605 33674
KETO-LowPass10 4378090 2209089 GC ORITER 4378301 2146341
KETO-LowPass20 4378090 2209089 KETO ORITER 4381514 2210205
KETO-LowPass50 4378090 2209089 PURINE ORITER 4337526 68211
KETO-LowPass90 4378090 2211227 INTER GC ORITER 4378301 2146341
KETO-LowPass95 4378090 2214434 INTER KETO ORITER 4381514 2210205
KETO-LowPass99 4378090 2222986 INTER PURINE ORITER 4337526 68211
NORMGC GC ORITER 4378301 2146341 CAI GC ORITER 4374155 2146341
NORMGC KETO ORITER 4381514 2210205 CAI KETO ORITER 4381514 2210205
NORMGC PURINE ORITER 4337526 71713 CAI PURINE ORITER 4232934 68211



genomicskew.png
GC skew in GC3/non-coding/whole genome
Fourier power spectrum
Fourier Power Spectrum
Fourier power spectrum (1 to 50Hz)
Fourier Power Spectrum (1 to 50Hz)

gcwin-gc-1000.png
GC Content
window: 1000 bp
gcwin-gc-5000.png
GC Content
window: 5000 bp
gcwin-gc-10000.png
GC Content
window: 10000 bp
gcwin-at-1000.png
AT Content
window: 1000 bp
gcwin-at-5000.png
AT Content
window: 5000 bp
gcwin-at-10000.png
AT Content
window: 10000 bp

gcwin-keto-1000.png
Keto Content
window: 1000 bp
gcwin-keto-5000.png
Keto Content
window: 5000 bp
gcwin-keto-10000.png
Keto Content
window: 10000 bp
gcwin-purine-1000.png
Purine Content
window: 1000 bp
gcwin-purine-5000.png
Purine Content
window: 5000 bp
gcwin-purine-10000.png
Purine Content
window: 10000 bp

gcskew-gc-1000.png
GC Skew
window: 1000 bp
gcskew-gc-5000.png
GC Skew
window: 5000 bp
gcskew-gc-10000.png
GC Skew
window: 10000 bp
gcskew-at-1000.png
AT Skew
window: 1000 bp
gcskew-at-5000.png
AT Skew
window: 5000 bp
gcskew-at-10000.png
AT Skew
window: 10000 bp

gcskew-keto-1000.png
Keto Skew
window: 1000 bp
gcskew-keto-5000.png
Keto Skew
window: 5000 bp
gcskew-keto-10000.png
Keto Skew
window: 10000 bp
gcskew-purine-1000.png
Purine Skew
window: 1000 bp
gcskew-purine-5000.png
Purine Skew
window: 5000 bp
gcskew-purine-10000.png
Purine Skew
window: 10000 bp

cum_gcskew-gc-1000.png
GC Skew(cumulative)
window: 1000 bp
cum_gcskew-gc-5000.png
GC Skew(cumulative)
window: 5000 bp
cum_gcskew-gc-10000.png
GC Skew(cumulative)
window: 10000 bp
cum_gcskew-at-1000.png
AT Skew(cumulative)
window: 1000 bp
cum_gcskew-at-5000.png
AT Skew(cumulative)
window: 5000 bp
cum_gcskew-at-10000.png
AT Skew(cumulative)
window: 10000 bp

cum_gcskew-keto-1000.png
Keto Skew(cumulative)
window: 1000 bp
cum_gcskew-keto-5000.png
Keto Skew(cumulative)
window: 5000 bp
cum_gcskew-keto-10000.png
Keto Skew(cumulative)
window: 10000 bp
cum_gcskew-purine-1000.png
Purine Skew(cumulative)
window: 1000 bp
cum_gcskew-purine-5000.png
Purine Skew(cumulative)
window: 5000 bp
cum_gcskew-purine-10000.png
Purine Skew(cumulative)
window: 10000 bp





(C) 2006 Institute for Advanced Biosciences, Keio University