NC_007677: Salinibacter ruber DSM 13855

ori position (bp) ter position (bp) ori position (bp) ter position (bp)
GC-LowPass10 16907 1868819 PURINE-LowPass10 34247 1885292
GC-LowPass20 16907 1869686 PURINE-LowPass20 34247 1885292
GC-LowPass50 16907 1869686 PURINE-LowPass50 34247 1886159
GC-LowPass90 18641 1870553 PURINE-LowPass90 35114 1887893
GC-LowPass95 3550799 1872287 PURINE-LowPass95 29045 1875755
GC-LowPass99 3550799 1868819 PURINE-LowPass99 12572 1875755
KETO-LowPass10 3550799 1868819 GC ORITER 3551263 1870903
KETO-LowPass20 3550799 1867952 KETO ORITER 3551197 1869007
KETO-LowPass50 3550799 1867952 PURINE ORITER 34495 1885814
KETO-LowPass90 3550799 1872287 INTER GC ORITER 3551263 1870903
KETO-LowPass95 3550799 1870553 INTER KETO ORITER 3551197 1869007
KETO-LowPass99 3550799 1861883 INTER PURINE ORITER 34495 1885814
NORMGC GC ORITER 3551263 1870903 CAI GC ORITER 3551263 1871212
NORMGC KETO ORITER 3551197 1869007 CAI KETO ORITER 3551197 1871409
NORMGC PURINE ORITER 3551803 1885814 CAI PURINE ORITER 3551803 1863863



genomicskew.png
GC skew in GC3/non-coding/whole genome
Fourier power spectrum
Fourier Power Spectrum
Fourier power spectrum (1 to 50Hz)
Fourier Power Spectrum (1 to 50Hz)

gcwin-gc-1000.png
GC Content
window: 1000 bp
gcwin-gc-5000.png
GC Content
window: 5000 bp
gcwin-gc-10000.png
GC Content
window: 10000 bp
gcwin-at-1000.png
AT Content
window: 1000 bp
gcwin-at-5000.png
AT Content
window: 5000 bp
gcwin-at-10000.png
AT Content
window: 10000 bp

gcwin-keto-1000.png
Keto Content
window: 1000 bp
gcwin-keto-5000.png
Keto Content
window: 5000 bp
gcwin-keto-10000.png
Keto Content
window: 10000 bp
gcwin-purine-1000.png
Purine Content
window: 1000 bp
gcwin-purine-5000.png
Purine Content
window: 5000 bp
gcwin-purine-10000.png
Purine Content
window: 10000 bp

gcskew-gc-1000.png
GC Skew
window: 1000 bp
gcskew-gc-5000.png
GC Skew
window: 5000 bp
gcskew-gc-10000.png
GC Skew
window: 10000 bp
gcskew-at-1000.png
AT Skew
window: 1000 bp
gcskew-at-5000.png
AT Skew
window: 5000 bp
gcskew-at-10000.png
AT Skew
window: 10000 bp

gcskew-keto-1000.png
Keto Skew
window: 1000 bp
gcskew-keto-5000.png
Keto Skew
window: 5000 bp
gcskew-keto-10000.png
Keto Skew
window: 10000 bp
gcskew-purine-1000.png
Purine Skew
window: 1000 bp
gcskew-purine-5000.png
Purine Skew
window: 5000 bp
gcskew-purine-10000.png
Purine Skew
window: 10000 bp

cum_gcskew-gc-1000.png
GC Skew(cumulative)
window: 1000 bp
cum_gcskew-gc-5000.png
GC Skew(cumulative)
window: 5000 bp
cum_gcskew-gc-10000.png
GC Skew(cumulative)
window: 10000 bp
cum_gcskew-at-1000.png
AT Skew(cumulative)
window: 1000 bp
cum_gcskew-at-5000.png
AT Skew(cumulative)
window: 5000 bp
cum_gcskew-at-10000.png
AT Skew(cumulative)
window: 10000 bp

cum_gcskew-keto-1000.png
Keto Skew(cumulative)
window: 1000 bp
cum_gcskew-keto-5000.png
Keto Skew(cumulative)
window: 5000 bp
cum_gcskew-keto-10000.png
Keto Skew(cumulative)
window: 10000 bp
cum_gcskew-purine-1000.png
Purine Skew(cumulative)
window: 1000 bp
cum_gcskew-purine-5000.png
Purine Skew(cumulative)
window: 5000 bp
cum_gcskew-purine-10000.png
Purine Skew(cumulative)
window: 10000 bp





(C) 2006 Institute for Advanced Biosciences, Keio University