NC_007643: Rhodospirillum rubrum ATCC 11170

ori position (bp) ter position (bp) ori position (bp) ter position (bp)
GC-LowPass10 4152951 2028951 PURINE-LowPass10 3924621 2129841
GC-LowPass20 4151889 2028951 PURINE-LowPass20 3924621 2131965
GC-LowPass50 4152951 2027889 PURINE-LowPass50 3924621 2131965
GC-LowPass90 4154013 2002401 PURINE-LowPass90 3924621 2131965
GC-LowPass95 4152951 2024703 PURINE-LowPass95 3924621 2122407
GC-LowPass99 3892761 2024703 PURINE-LowPass99 4014891 2084175
KETO-LowPass10 4152951 2028951 GC ORITER 4154750 2028278
KETO-LowPass20 4154013 2028951 KETO ORITER 4154750 2029628
KETO-LowPass50 4154013 2028951 PURINE ORITER 3925357 2132263
KETO-LowPass90 4156137 2028951 INTER GC ORITER 4154750 2028278
KETO-LowPass95 4157199 2024703 INTER KETO ORITER 4154750 2029628
KETO-LowPass99 4168881 1986471 INTER PURINE ORITER 3925357 2132263
NORMGC GC ORITER 4154750 2028278 CAI GC ORITER 4142961 2028278
NORMGC KETO ORITER 4154750 2029628 CAI KETO ORITER 4154750 2029628
NORMGC PURINE ORITER 3925357 2132263 CAI PURINE ORITER 3925357 2132263



genomicskew.png
GC skew in GC3/non-coding/whole genome
Fourier power spectrum
Fourier Power Spectrum
Fourier power spectrum (1 to 50Hz)
Fourier Power Spectrum (1 to 50Hz)

gcwin-gc-1000.png
GC Content
window: 1000 bp
gcwin-gc-5000.png
GC Content
window: 5000 bp
gcwin-gc-10000.png
GC Content
window: 10000 bp
gcwin-at-1000.png
AT Content
window: 1000 bp
gcwin-at-5000.png
AT Content
window: 5000 bp
gcwin-at-10000.png
AT Content
window: 10000 bp

gcwin-keto-1000.png
Keto Content
window: 1000 bp
gcwin-keto-5000.png
Keto Content
window: 5000 bp
gcwin-keto-10000.png
Keto Content
window: 10000 bp
gcwin-purine-1000.png
Purine Content
window: 1000 bp
gcwin-purine-5000.png
Purine Content
window: 5000 bp
gcwin-purine-10000.png
Purine Content
window: 10000 bp

gcskew-gc-1000.png
GC Skew
window: 1000 bp
gcskew-gc-5000.png
GC Skew
window: 5000 bp
gcskew-gc-10000.png
GC Skew
window: 10000 bp
gcskew-at-1000.png
AT Skew
window: 1000 bp
gcskew-at-5000.png
AT Skew
window: 5000 bp
gcskew-at-10000.png
AT Skew
window: 10000 bp

gcskew-keto-1000.png
Keto Skew
window: 1000 bp
gcskew-keto-5000.png
Keto Skew
window: 5000 bp
gcskew-keto-10000.png
Keto Skew
window: 10000 bp
gcskew-purine-1000.png
Purine Skew
window: 1000 bp
gcskew-purine-5000.png
Purine Skew
window: 5000 bp
gcskew-purine-10000.png
Purine Skew
window: 10000 bp

cum_gcskew-gc-1000.png
GC Skew(cumulative)
window: 1000 bp
cum_gcskew-gc-5000.png
GC Skew(cumulative)
window: 5000 bp
cum_gcskew-gc-10000.png
GC Skew(cumulative)
window: 10000 bp
cum_gcskew-at-1000.png
AT Skew(cumulative)
window: 1000 bp
cum_gcskew-at-5000.png
AT Skew(cumulative)
window: 5000 bp
cum_gcskew-at-10000.png
AT Skew(cumulative)
window: 10000 bp

cum_gcskew-keto-1000.png
Keto Skew(cumulative)
window: 1000 bp
cum_gcskew-keto-5000.png
Keto Skew(cumulative)
window: 5000 bp
cum_gcskew-keto-10000.png
Keto Skew(cumulative)
window: 10000 bp
cum_gcskew-purine-1000.png
Purine Skew(cumulative)
window: 1000 bp
cum_gcskew-purine-5000.png
Purine Skew(cumulative)
window: 5000 bp
cum_gcskew-purine-10000.png
Purine Skew(cumulative)
window: 10000 bp





(C) 2006 Institute for Advanced Biosciences, Keio University