NC_007613: Shigella boydii Sb227

ori position (bp) ter position (bp) ori position (bp) ter position (bp)
GC-LowPass10 3661409 1598799 PURINE-LowPass10 3602950 1574533
GC-LowPass20 3661409 1597696 PURINE-LowPass20 3602950 1574533
GC-LowPass50 3661409 1597696 PURINE-LowPass50 3601847 1573430
GC-LowPass90 3661409 1598799 PURINE-LowPass90 3602950 1574533
GC-LowPass95 3661409 1593284 PURINE-LowPass95 3598538 1589975
GC-LowPass99 3634937 1553576 PURINE-LowPass99 3591920 1576739
KETO-LowPass10 3666924 1596593 GC ORITER 3662301 1599774
KETO-LowPass20 3666924 1596593 KETO ORITER 3667691 1596719
KETO-LowPass50 3666924 1595490 PURINE ORITER 3602047 1574560
KETO-LowPass90 3666924 1595490 INTER GC ORITER 3662301 1599774
KETO-LowPass95 3674645 1595490 INTER KETO ORITER 3667691 1596719
KETO-LowPass99 3679057 1516074 INTER PURINE ORITER 3602047 1574560
NORMGC GC ORITER 3662301 1599774 CAI GC ORITER 651 1574096
NORMGC KETO ORITER 3667691 1596719 CAI KETO ORITER 3668358 1593849
NORMGC PURINE ORITER 3602047 1574560 CAI PURINE ORITER 40 1574067



genomicskew.png
GC skew in GC3/non-coding/whole genome
Fourier power spectrum
Fourier Power Spectrum
Fourier power spectrum (1 to 50Hz)
Fourier Power Spectrum (1 to 50Hz)

gcwin-gc-1000.png
GC Content
window: 1000 bp
gcwin-gc-5000.png
GC Content
window: 5000 bp
gcwin-gc-10000.png
GC Content
window: 10000 bp
gcwin-at-1000.png
AT Content
window: 1000 bp
gcwin-at-5000.png
AT Content
window: 5000 bp
gcwin-at-10000.png
AT Content
window: 10000 bp

gcwin-keto-1000.png
Keto Content
window: 1000 bp
gcwin-keto-5000.png
Keto Content
window: 5000 bp
gcwin-keto-10000.png
Keto Content
window: 10000 bp
gcwin-purine-1000.png
Purine Content
window: 1000 bp
gcwin-purine-5000.png
Purine Content
window: 5000 bp
gcwin-purine-10000.png
Purine Content
window: 10000 bp

gcskew-gc-1000.png
GC Skew
window: 1000 bp
gcskew-gc-5000.png
GC Skew
window: 5000 bp
gcskew-gc-10000.png
GC Skew
window: 10000 bp
gcskew-at-1000.png
AT Skew
window: 1000 bp
gcskew-at-5000.png
AT Skew
window: 5000 bp
gcskew-at-10000.png
AT Skew
window: 10000 bp

gcskew-keto-1000.png
Keto Skew
window: 1000 bp
gcskew-keto-5000.png
Keto Skew
window: 5000 bp
gcskew-keto-10000.png
Keto Skew
window: 10000 bp
gcskew-purine-1000.png
Purine Skew
window: 1000 bp
gcskew-purine-5000.png
Purine Skew
window: 5000 bp
gcskew-purine-10000.png
Purine Skew
window: 10000 bp

cum_gcskew-gc-1000.png
GC Skew(cumulative)
window: 1000 bp
cum_gcskew-gc-5000.png
GC Skew(cumulative)
window: 5000 bp
cum_gcskew-gc-10000.png
GC Skew(cumulative)
window: 10000 bp
cum_gcskew-at-1000.png
AT Skew(cumulative)
window: 1000 bp
cum_gcskew-at-5000.png
AT Skew(cumulative)
window: 5000 bp
cum_gcskew-at-10000.png
AT Skew(cumulative)
window: 10000 bp

cum_gcskew-keto-1000.png
Keto Skew(cumulative)
window: 1000 bp
cum_gcskew-keto-5000.png
Keto Skew(cumulative)
window: 5000 bp
cum_gcskew-keto-10000.png
Keto Skew(cumulative)
window: 10000 bp
cum_gcskew-purine-1000.png
Purine Skew(cumulative)
window: 1000 bp
cum_gcskew-purine-5000.png
Purine Skew(cumulative)
window: 5000 bp
cum_gcskew-purine-10000.png
Purine Skew(cumulative)
window: 10000 bp





(C) 2006 Institute for Advanced Biosciences, Keio University