NC_007606: Shigella dysenteriae Sd197

ori position (bp) ter position (bp) ori position (bp) ter position (bp)
GC-LowPass10 4309305 1486537 PURINE-LowPass10 4286919 1489735
GC-LowPass20 4309305 1486537 PURINE-LowPass20 4286919 1489735
GC-LowPass50 4308239 1486537 PURINE-LowPass50 4287985 1490801
GC-LowPass90 4312503 1488669 PURINE-LowPass90 4286919 1490801
GC-LowPass95 4301843 1480141 PURINE-LowPass95 4290117 1483339
GC-LowPass99 4314635 1486537 PURINE-LowPass99 4262401 1474811
KETO-LowPass10 3921281 1485471 GC ORITER 4309864 1486989
KETO-LowPass20 3922347 1485471 KETO ORITER 3921872 1461217
KETO-LowPass50 3922347 1460953 PURINE ORITER 4288098 1490688
KETO-LowPass90 3913819 1479075 INTER GC ORITER 4309864 1486989
KETO-LowPass95 3920215 1469481 INTER KETO ORITER 3921872 1461217
KETO-LowPass99 3941535 1497197 INTER PURINE ORITER 4288098 1490688
NORMGC GC ORITER 4309864 1486989 CAI GC ORITER 4317275 1486989
NORMGC KETO ORITER 3941770 1486175 CAI KETO ORITER 3921872 1486175
NORMGC PURINE ORITER 4288098 1490688 CAI PURINE ORITER 4288080 1490688



genomicskew.png
GC skew in GC3/non-coding/whole genome
Fourier power spectrum
Fourier Power Spectrum
Fourier power spectrum (1 to 50Hz)
Fourier Power Spectrum (1 to 50Hz)

gcwin-gc-1000.png
GC Content
window: 1000 bp
gcwin-gc-5000.png
GC Content
window: 5000 bp
gcwin-gc-10000.png
GC Content
window: 10000 bp
gcwin-at-1000.png
AT Content
window: 1000 bp
gcwin-at-5000.png
AT Content
window: 5000 bp
gcwin-at-10000.png
AT Content
window: 10000 bp

gcwin-keto-1000.png
Keto Content
window: 1000 bp
gcwin-keto-5000.png
Keto Content
window: 5000 bp
gcwin-keto-10000.png
Keto Content
window: 10000 bp
gcwin-purine-1000.png
Purine Content
window: 1000 bp
gcwin-purine-5000.png
Purine Content
window: 5000 bp
gcwin-purine-10000.png
Purine Content
window: 10000 bp

gcskew-gc-1000.png
GC Skew
window: 1000 bp
gcskew-gc-5000.png
GC Skew
window: 5000 bp
gcskew-gc-10000.png
GC Skew
window: 10000 bp
gcskew-at-1000.png
AT Skew
window: 1000 bp
gcskew-at-5000.png
AT Skew
window: 5000 bp
gcskew-at-10000.png
AT Skew
window: 10000 bp

gcskew-keto-1000.png
Keto Skew
window: 1000 bp
gcskew-keto-5000.png
Keto Skew
window: 5000 bp
gcskew-keto-10000.png
Keto Skew
window: 10000 bp
gcskew-purine-1000.png
Purine Skew
window: 1000 bp
gcskew-purine-5000.png
Purine Skew
window: 5000 bp
gcskew-purine-10000.png
Purine Skew
window: 10000 bp

cum_gcskew-gc-1000.png
GC Skew(cumulative)
window: 1000 bp
cum_gcskew-gc-5000.png
GC Skew(cumulative)
window: 5000 bp
cum_gcskew-gc-10000.png
GC Skew(cumulative)
window: 10000 bp
cum_gcskew-at-1000.png
AT Skew(cumulative)
window: 1000 bp
cum_gcskew-at-5000.png
AT Skew(cumulative)
window: 5000 bp
cum_gcskew-at-10000.png
AT Skew(cumulative)
window: 10000 bp

cum_gcskew-keto-1000.png
Keto Skew(cumulative)
window: 1000 bp
cum_gcskew-keto-5000.png
Keto Skew(cumulative)
window: 5000 bp
cum_gcskew-keto-10000.png
Keto Skew(cumulative)
window: 10000 bp
cum_gcskew-purine-1000.png
Purine Skew(cumulative)
window: 1000 bp
cum_gcskew-purine-5000.png
Purine Skew(cumulative)
window: 5000 bp
cum_gcskew-purine-10000.png
Purine Skew(cumulative)
window: 10000 bp





(C) 2006 Institute for Advanced Biosciences, Keio University