NC_007514: Chlorobium chlorochromatii CaD3

ori position (bp) ter position (bp) ori position (bp) ter position (bp)
GC-LowPass10 7838 1118882 PURINE-LowPass10 97499 1341467
GC-LowPass20 7838 1118882 PURINE-LowPass20 97499 1341467
GC-LowPass50 7838 1118882 PURINE-LowPass50 97499 1341467
GC-LowPass90 5957 1119509 PURINE-LowPass90 97499 1340840
GC-LowPass95 314 1118882 PURINE-LowPass95 95618 1336451
GC-LowPass99 314 1116374 PURINE-LowPass99 536399 1597910
KETO-LowPass10 2195 1115120 GC ORITER 7962 1119640
KETO-LowPass20 2195 1115120 KETO ORITER 2549 1115507
KETO-LowPass50 2195 1115120 PURINE ORITER 97775 1341365
KETO-LowPass90 3449 1118255 INTER GC ORITER 7962 1119640
KETO-LowPass95 314 1117628 INTER KETO ORITER 2549 1115507
KETO-LowPass99 314 1110104 INTER PURINE ORITER 97775 1341365
NORMGC GC ORITER 7962 1119640 CAI GC ORITER 7962 1119640
NORMGC KETO ORITER 2549 1115507 CAI KETO ORITER 2549 1115507
NORMGC PURINE ORITER 554747 1339962 CAI PURINE ORITER 554747 1341874



genomicskew.png
GC skew in GC3/non-coding/whole genome
Fourier power spectrum
Fourier Power Spectrum
Fourier power spectrum (1 to 50Hz)
Fourier Power Spectrum (1 to 50Hz)

gcwin-gc-1000.png
GC Content
window: 1000 bp
gcwin-gc-5000.png
GC Content
window: 5000 bp
gcwin-gc-10000.png
GC Content
window: 10000 bp
gcwin-at-1000.png
AT Content
window: 1000 bp
gcwin-at-5000.png
AT Content
window: 5000 bp
gcwin-at-10000.png
AT Content
window: 10000 bp

gcwin-keto-1000.png
Keto Content
window: 1000 bp
gcwin-keto-5000.png
Keto Content
window: 5000 bp
gcwin-keto-10000.png
Keto Content
window: 10000 bp
gcwin-purine-1000.png
Purine Content
window: 1000 bp
gcwin-purine-5000.png
Purine Content
window: 5000 bp
gcwin-purine-10000.png
Purine Content
window: 10000 bp

gcskew-gc-1000.png
GC Skew
window: 1000 bp
gcskew-gc-5000.png
GC Skew
window: 5000 bp
gcskew-gc-10000.png
GC Skew
window: 10000 bp
gcskew-at-1000.png
AT Skew
window: 1000 bp
gcskew-at-5000.png
AT Skew
window: 5000 bp
gcskew-at-10000.png
AT Skew
window: 10000 bp

gcskew-keto-1000.png
Keto Skew
window: 1000 bp
gcskew-keto-5000.png
Keto Skew
window: 5000 bp
gcskew-keto-10000.png
Keto Skew
window: 10000 bp
gcskew-purine-1000.png
Purine Skew
window: 1000 bp
gcskew-purine-5000.png
Purine Skew
window: 5000 bp
gcskew-purine-10000.png
Purine Skew
window: 10000 bp

cum_gcskew-gc-1000.png
GC Skew(cumulative)
window: 1000 bp
cum_gcskew-gc-5000.png
GC Skew(cumulative)
window: 5000 bp
cum_gcskew-gc-10000.png
GC Skew(cumulative)
window: 10000 bp
cum_gcskew-at-1000.png
AT Skew(cumulative)
window: 1000 bp
cum_gcskew-at-5000.png
AT Skew(cumulative)
window: 5000 bp
cum_gcskew-at-10000.png
AT Skew(cumulative)
window: 10000 bp

cum_gcskew-keto-1000.png
Keto Skew(cumulative)
window: 1000 bp
cum_gcskew-keto-5000.png
Keto Skew(cumulative)
window: 5000 bp
cum_gcskew-keto-10000.png
Keto Skew(cumulative)
window: 10000 bp
cum_gcskew-purine-1000.png
Purine Skew(cumulative)
window: 1000 bp
cum_gcskew-purine-5000.png
Purine Skew(cumulative)
window: 5000 bp
cum_gcskew-purine-10000.png
Purine Skew(cumulative)
window: 10000 bp





(C) 2006 Institute for Advanced Biosciences, Keio University