NC_007482: Pseudoalteromonas haloplanktis TAC125 chromosome II

ori position (bp) ter position (bp) ori position (bp) ter position (bp)
GC-LowPass10 16043 623953 PURINE-LowPass10 78 612173
GC-LowPass20 16043 623953 PURINE-LowPass20 78 612173
GC-LowPass50 15888 623953 PURINE-LowPass50 78 612173
GC-LowPass90 15733 623488 PURINE-LowPass90 543 612173
GC-LowPass95 16043 625038 PURINE-LowPass95 78 611398
GC-LowPass99 19453 630308 PURINE-LowPass99 78 611398
KETO-LowPass10 37743 626278 GC ORITER 16089 624053
KETO-LowPass20 37743 626433 KETO ORITER 37843 626368
KETO-LowPass50 37743 626433 PURINE ORITER 32 612240
KETO-LowPass90 37743 627363 INTER GC ORITER 16089 624053
KETO-LowPass95 28133 626743 INTER KETO ORITER 37843 626368
KETO-LowPass99 36813 630618 INTER PURINE ORITER 32 612240
NORMGC GC ORITER 30365 624053 CAI GC ORITER 16089 624053
NORMGC KETO ORITER 37843 580924 CAI KETO ORITER 10820 446827
NORMGC PURINE ORITER 32 621928 CAI PURINE ORITER 62616 612240



genomicskew.png
GC skew in GC3/non-coding/whole genome
Fourier power spectrum
Fourier Power Spectrum
Fourier power spectrum (1 to 50Hz)
Fourier Power Spectrum (1 to 50Hz)

gcwin-gc-1000.png
GC Content
window: 1000 bp
gcwin-gc-5000.png
GC Content
window: 5000 bp
gcwin-gc-10000.png
GC Content
window: 10000 bp
gcwin-at-1000.png
AT Content
window: 1000 bp
gcwin-at-5000.png
AT Content
window: 5000 bp
gcwin-at-10000.png
AT Content
window: 10000 bp

gcwin-keto-1000.png
Keto Content
window: 1000 bp
gcwin-keto-5000.png
Keto Content
window: 5000 bp
gcwin-keto-10000.png
Keto Content
window: 10000 bp
gcwin-purine-1000.png
Purine Content
window: 1000 bp
gcwin-purine-5000.png
Purine Content
window: 5000 bp
gcwin-purine-10000.png
Purine Content
window: 10000 bp

gcskew-gc-1000.png
GC Skew
window: 1000 bp
gcskew-gc-5000.png
GC Skew
window: 5000 bp
gcskew-gc-10000.png
GC Skew
window: 10000 bp
gcskew-at-1000.png
AT Skew
window: 1000 bp
gcskew-at-5000.png
AT Skew
window: 5000 bp
gcskew-at-10000.png
AT Skew
window: 10000 bp

gcskew-keto-1000.png
Keto Skew
window: 1000 bp
gcskew-keto-5000.png
Keto Skew
window: 5000 bp
gcskew-keto-10000.png
Keto Skew
window: 10000 bp
gcskew-purine-1000.png
Purine Skew
window: 1000 bp
gcskew-purine-5000.png
Purine Skew
window: 5000 bp
gcskew-purine-10000.png
Purine Skew
window: 10000 bp

cum_gcskew-gc-1000.png
GC Skew(cumulative)
window: 1000 bp
cum_gcskew-gc-5000.png
GC Skew(cumulative)
window: 5000 bp
cum_gcskew-gc-10000.png
GC Skew(cumulative)
window: 10000 bp
cum_gcskew-at-1000.png
AT Skew(cumulative)
window: 1000 bp
cum_gcskew-at-5000.png
AT Skew(cumulative)
window: 5000 bp
cum_gcskew-at-10000.png
AT Skew(cumulative)
window: 10000 bp

cum_gcskew-keto-1000.png
Keto Skew(cumulative)
window: 1000 bp
cum_gcskew-keto-5000.png
Keto Skew(cumulative)
window: 5000 bp
cum_gcskew-keto-10000.png
Keto Skew(cumulative)
window: 10000 bp
cum_gcskew-purine-1000.png
Purine Skew(cumulative)
window: 1000 bp
cum_gcskew-purine-5000.png
Purine Skew(cumulative)
window: 5000 bp
cum_gcskew-purine-10000.png
Purine Skew(cumulative)
window: 10000 bp





(C) 2006 Institute for Advanced Biosciences, Keio University