NC_007481: Pseudoalteromonas haloplanktis TAC125 chromosome I

ori position (bp) ter position (bp) ori position (bp) ter position (bp)
GC-LowPass10 392 1621704 PURINE-LowPass10 3210872 1622488
GC-LowPass20 392 1621704 PURINE-LowPass20 3210872 1622488
GC-LowPass50 392 1622488 PURINE-LowPass50 3210088 1622488
GC-LowPass90 392 1620920 PURINE-LowPass90 3208520 1623272
GC-LowPass95 392 1621704 PURINE-LowPass95 3206168 1623272
GC-LowPass99 5096 1642088 PURINE-LowPass99 3210872 1620136
KETO-LowPass10 12936 1708728 GC ORITER 31 1622735
KETO-LowPass20 12936 1707944 KETO ORITER 13375 1709224
KETO-LowPass50 12152 1708728 PURINE ORITER 3211900 1623082
KETO-LowPass90 13720 1709512 INTER GC ORITER 31 1622735
KETO-LowPass95 4312 1709512 INTER KETO ORITER 13375 1709224
KETO-LowPass99 392 1682072 INTER PURINE ORITER 3211900 1623082
NORMGC GC ORITER 31 1622735 CAI GC ORITER 31 1619581
NORMGC KETO ORITER 13375 1709224 CAI KETO ORITER 13375 1709224
NORMGC PURINE ORITER 3211900 1625128 CAI PURINE ORITER 3211900 1623155



genomicskew.png
GC skew in GC3/non-coding/whole genome
Fourier power spectrum
Fourier Power Spectrum
Fourier power spectrum (1 to 50Hz)
Fourier Power Spectrum (1 to 50Hz)

gcwin-gc-1000.png
GC Content
window: 1000 bp
gcwin-gc-5000.png
GC Content
window: 5000 bp
gcwin-gc-10000.png
GC Content
window: 10000 bp
gcwin-at-1000.png
AT Content
window: 1000 bp
gcwin-at-5000.png
AT Content
window: 5000 bp
gcwin-at-10000.png
AT Content
window: 10000 bp

gcwin-keto-1000.png
Keto Content
window: 1000 bp
gcwin-keto-5000.png
Keto Content
window: 5000 bp
gcwin-keto-10000.png
Keto Content
window: 10000 bp
gcwin-purine-1000.png
Purine Content
window: 1000 bp
gcwin-purine-5000.png
Purine Content
window: 5000 bp
gcwin-purine-10000.png
Purine Content
window: 10000 bp

gcskew-gc-1000.png
GC Skew
window: 1000 bp
gcskew-gc-5000.png
GC Skew
window: 5000 bp
gcskew-gc-10000.png
GC Skew
window: 10000 bp
gcskew-at-1000.png
AT Skew
window: 1000 bp
gcskew-at-5000.png
AT Skew
window: 5000 bp
gcskew-at-10000.png
AT Skew
window: 10000 bp

gcskew-keto-1000.png
Keto Skew
window: 1000 bp
gcskew-keto-5000.png
Keto Skew
window: 5000 bp
gcskew-keto-10000.png
Keto Skew
window: 10000 bp
gcskew-purine-1000.png
Purine Skew
window: 1000 bp
gcskew-purine-5000.png
Purine Skew
window: 5000 bp
gcskew-purine-10000.png
Purine Skew
window: 10000 bp

cum_gcskew-gc-1000.png
GC Skew(cumulative)
window: 1000 bp
cum_gcskew-gc-5000.png
GC Skew(cumulative)
window: 5000 bp
cum_gcskew-gc-10000.png
GC Skew(cumulative)
window: 10000 bp
cum_gcskew-at-1000.png
AT Skew(cumulative)
window: 1000 bp
cum_gcskew-at-5000.png
AT Skew(cumulative)
window: 5000 bp
cum_gcskew-at-10000.png
AT Skew(cumulative)
window: 10000 bp

cum_gcskew-keto-1000.png
Keto Skew(cumulative)
window: 1000 bp
cum_gcskew-keto-5000.png
Keto Skew(cumulative)
window: 5000 bp
cum_gcskew-keto-10000.png
Keto Skew(cumulative)
window: 10000 bp
cum_gcskew-purine-1000.png
Purine Skew(cumulative)
window: 1000 bp
cum_gcskew-purine-5000.png
Purine Skew(cumulative)
window: 5000 bp
cum_gcskew-purine-10000.png
Purine Skew(cumulative)
window: 10000 bp





(C) 2006 Institute for Advanced Biosciences, Keio University