NC_007429: Chlamydia trachomatis A/HAR-13

ori position (bp) ter position (bp) ori position (bp) ter position (bp)
GC-LowPass10 723011 196977 PURINE-LowPass10 721741 196977
GC-LowPass20 723011 196977 PURINE-LowPass20 721741 196977
GC-LowPass50 723011 196977 PURINE-LowPass50 721995 196977
GC-LowPass90 722249 197231 PURINE-LowPass90 721233 196215
GC-LowPass95 722249 197739 PURINE-LowPass95 720725 196723
GC-LowPass99 719201 202565 PURINE-LowPass99 720217 196723
KETO-LowPass10 723011 203327 GC ORITER 723108 197168
KETO-LowPass20 723011 203327 KETO ORITER 723072 203568
KETO-LowPass50 723011 203581 PURINE ORITER 721969 197171
KETO-LowPass90 722757 210439 INTER GC ORITER 723108 197168
KETO-LowPass95 722503 208153 INTER KETO ORITER 723072 203568
KETO-LowPass99 718947 207137 INTER PURINE ORITER 721969 197171
NORMGC GC ORITER 723108 200000 CAI GC ORITER 723108 197168
NORMGC KETO ORITER 723072 203568 CAI KETO ORITER 723072 203568
NORMGC PURINE ORITER 721969 201939 CAI PURINE ORITER 721969 197171



genomicskew.png
GC skew in GC3/non-coding/whole genome
Fourier power spectrum
Fourier Power Spectrum
Fourier power spectrum (1 to 50Hz)
Fourier Power Spectrum (1 to 50Hz)

gcwin-gc-1000.png
GC Content
window: 1000 bp
gcwin-gc-5000.png
GC Content
window: 5000 bp
gcwin-gc-10000.png
GC Content
window: 10000 bp
gcwin-at-1000.png
AT Content
window: 1000 bp
gcwin-at-5000.png
AT Content
window: 5000 bp
gcwin-at-10000.png
AT Content
window: 10000 bp

gcwin-keto-1000.png
Keto Content
window: 1000 bp
gcwin-keto-5000.png
Keto Content
window: 5000 bp
gcwin-keto-10000.png
Keto Content
window: 10000 bp
gcwin-purine-1000.png
Purine Content
window: 1000 bp
gcwin-purine-5000.png
Purine Content
window: 5000 bp
gcwin-purine-10000.png
Purine Content
window: 10000 bp

gcskew-gc-1000.png
GC Skew
window: 1000 bp
gcskew-gc-5000.png
GC Skew
window: 5000 bp
gcskew-gc-10000.png
GC Skew
window: 10000 bp
gcskew-at-1000.png
AT Skew
window: 1000 bp
gcskew-at-5000.png
AT Skew
window: 5000 bp
gcskew-at-10000.png
AT Skew
window: 10000 bp

gcskew-keto-1000.png
Keto Skew
window: 1000 bp
gcskew-keto-5000.png
Keto Skew
window: 5000 bp
gcskew-keto-10000.png
Keto Skew
window: 10000 bp
gcskew-purine-1000.png
Purine Skew
window: 1000 bp
gcskew-purine-5000.png
Purine Skew
window: 5000 bp
gcskew-purine-10000.png
Purine Skew
window: 10000 bp

cum_gcskew-gc-1000.png
GC Skew(cumulative)
window: 1000 bp
cum_gcskew-gc-5000.png
GC Skew(cumulative)
window: 5000 bp
cum_gcskew-gc-10000.png
GC Skew(cumulative)
window: 10000 bp
cum_gcskew-at-1000.png
AT Skew(cumulative)
window: 1000 bp
cum_gcskew-at-5000.png
AT Skew(cumulative)
window: 5000 bp
cum_gcskew-at-10000.png
AT Skew(cumulative)
window: 10000 bp

cum_gcskew-keto-1000.png
Keto Skew(cumulative)
window: 1000 bp
cum_gcskew-keto-5000.png
Keto Skew(cumulative)
window: 5000 bp
cum_gcskew-keto-10000.png
Keto Skew(cumulative)
window: 10000 bp
cum_gcskew-purine-1000.png
Purine Skew(cumulative)
window: 1000 bp
cum_gcskew-purine-5000.png
Purine Skew(cumulative)
window: 5000 bp
cum_gcskew-purine-10000.png
Purine Skew(cumulative)
window: 10000 bp





(C) 2006 Institute for Advanced Biosciences, Keio University