NC_007350: Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305

ori position (bp) ter position (bp) ori position (bp) ter position (bp)
GC-LowPass10 307 1387947 PURINE-LowPass10 307 1384877
GC-LowPass20 307 1387947 PURINE-LowPass20 307 1384877
GC-LowPass50 307 1388561 PURINE-LowPass50 307 1385491
GC-LowPass90 921 1388561 PURINE-LowPass90 307 1385491
GC-LowPass95 921 1383035 PURINE-LowPass95 307 1384877
GC-LowPass99 2149 1375053 PURINE-LowPass99 307 1385491
KETO-LowPass10 88109 1099981 GC ORITER 271 1388394
KETO-LowPass20 88109 1100595 KETO ORITER 88466 1097063
KETO-LowPass50 88109 1099981 PURINE ORITER 267 1385398
KETO-LowPass90 87495 1098139 INTER GC ORITER 271 1388394
KETO-LowPass95 88109 1105507 INTER KETO ORITER 88466 1097063
KETO-LowPass99 61093 1130067 INTER PURINE ORITER 267 1385398
NORMGC GC ORITER 271 1388394 CAI GC ORITER 271 1388394
NORMGC KETO ORITER 88466 1097063 CAI KETO ORITER 88466 1097063
NORMGC PURINE ORITER 267 1385398 CAI PURINE ORITER 267 1385398



genomicskew.png
GC skew in GC3/non-coding/whole genome
Fourier power spectrum
Fourier Power Spectrum
Fourier power spectrum (1 to 50Hz)
Fourier Power Spectrum (1 to 50Hz)

gcwin-gc-1000.png
GC Content
window: 1000 bp
gcwin-gc-5000.png
GC Content
window: 5000 bp
gcwin-gc-10000.png
GC Content
window: 10000 bp
gcwin-at-1000.png
AT Content
window: 1000 bp
gcwin-at-5000.png
AT Content
window: 5000 bp
gcwin-at-10000.png
AT Content
window: 10000 bp

gcwin-keto-1000.png
Keto Content
window: 1000 bp
gcwin-keto-5000.png
Keto Content
window: 5000 bp
gcwin-keto-10000.png
Keto Content
window: 10000 bp
gcwin-purine-1000.png
Purine Content
window: 1000 bp
gcwin-purine-5000.png
Purine Content
window: 5000 bp
gcwin-purine-10000.png
Purine Content
window: 10000 bp

gcskew-gc-1000.png
GC Skew
window: 1000 bp
gcskew-gc-5000.png
GC Skew
window: 5000 bp
gcskew-gc-10000.png
GC Skew
window: 10000 bp
gcskew-at-1000.png
AT Skew
window: 1000 bp
gcskew-at-5000.png
AT Skew
window: 5000 bp
gcskew-at-10000.png
AT Skew
window: 10000 bp

gcskew-keto-1000.png
Keto Skew
window: 1000 bp
gcskew-keto-5000.png
Keto Skew
window: 5000 bp
gcskew-keto-10000.png
Keto Skew
window: 10000 bp
gcskew-purine-1000.png
Purine Skew
window: 1000 bp
gcskew-purine-5000.png
Purine Skew
window: 5000 bp
gcskew-purine-10000.png
Purine Skew
window: 10000 bp

cum_gcskew-gc-1000.png
GC Skew(cumulative)
window: 1000 bp
cum_gcskew-gc-5000.png
GC Skew(cumulative)
window: 5000 bp
cum_gcskew-gc-10000.png
GC Skew(cumulative)
window: 10000 bp
cum_gcskew-at-1000.png
AT Skew(cumulative)
window: 1000 bp
cum_gcskew-at-5000.png
AT Skew(cumulative)
window: 5000 bp
cum_gcskew-at-10000.png
AT Skew(cumulative)
window: 10000 bp

cum_gcskew-keto-1000.png
Keto Skew(cumulative)
window: 1000 bp
cum_gcskew-keto-5000.png
Keto Skew(cumulative)
window: 5000 bp
cum_gcskew-keto-10000.png
Keto Skew(cumulative)
window: 10000 bp
cum_gcskew-purine-1000.png
Purine Skew(cumulative)
window: 1000 bp
cum_gcskew-purine-5000.png
Purine Skew(cumulative)
window: 5000 bp
cum_gcskew-purine-10000.png
Purine Skew(cumulative)
window: 10000 bp





(C) 2006 Institute for Advanced Biosciences, Keio University