NC_007168: Staphylococcus haemolyticus JCSC1435

ori position (bp) ter position (bp) ori position (bp) ter position (bp)
GC-LowPass10 2293 1548748 PURINE-LowPass10 328 1544818
GC-LowPass20 2293 1548093 PURINE-LowPass20 328 1544818
GC-LowPass50 2948 1548748 PURINE-LowPass50 328 1544818
GC-LowPass90 1638 1546128 PURINE-LowPass90 983 1545473
GC-LowPass95 3603 1544163 PURINE-LowPass95 328 1544163
GC-LowPass99 328 1538268 PURINE-LowPass99 328 1552023
KETO-LowPass10 1544818 784363 GC ORITER 2712 1549917
KETO-LowPass20 1544818 784363 KETO ORITER 1544865 784640
KETO-LowPass50 1544818 784363 PURINE ORITER 484 1545040
KETO-LowPass90 1543508 799428 INTER GC ORITER 2712 1549917
KETO-LowPass95 1544163 792878 INTER KETO ORITER 1544865 784640
KETO-LowPass99 1576913 959248 INTER PURINE ORITER 484 1545040
NORMGC GC ORITER 2712 1549917 CAI GC ORITER 2712 1549917
NORMGC KETO ORITER 1544865 799015 CAI KETO ORITER 1544865 784640
NORMGC PURINE ORITER 484 1545040 CAI PURINE ORITER 484 1545040



genomicskew.png
GC skew in GC3/non-coding/whole genome
Fourier power spectrum
Fourier Power Spectrum
Fourier power spectrum (1 to 50Hz)
Fourier Power Spectrum (1 to 50Hz)

gcwin-gc-1000.png
GC Content
window: 1000 bp
gcwin-gc-5000.png
GC Content
window: 5000 bp
gcwin-gc-10000.png
GC Content
window: 10000 bp
gcwin-at-1000.png
AT Content
window: 1000 bp
gcwin-at-5000.png
AT Content
window: 5000 bp
gcwin-at-10000.png
AT Content
window: 10000 bp

gcwin-keto-1000.png
Keto Content
window: 1000 bp
gcwin-keto-5000.png
Keto Content
window: 5000 bp
gcwin-keto-10000.png
Keto Content
window: 10000 bp
gcwin-purine-1000.png
Purine Content
window: 1000 bp
gcwin-purine-5000.png
Purine Content
window: 5000 bp
gcwin-purine-10000.png
Purine Content
window: 10000 bp

gcskew-gc-1000.png
GC Skew
window: 1000 bp
gcskew-gc-5000.png
GC Skew
window: 5000 bp
gcskew-gc-10000.png
GC Skew
window: 10000 bp
gcskew-at-1000.png
AT Skew
window: 1000 bp
gcskew-at-5000.png
AT Skew
window: 5000 bp
gcskew-at-10000.png
AT Skew
window: 10000 bp

gcskew-keto-1000.png
Keto Skew
window: 1000 bp
gcskew-keto-5000.png
Keto Skew
window: 5000 bp
gcskew-keto-10000.png
Keto Skew
window: 10000 bp
gcskew-purine-1000.png
Purine Skew
window: 1000 bp
gcskew-purine-5000.png
Purine Skew
window: 5000 bp
gcskew-purine-10000.png
Purine Skew
window: 10000 bp

cum_gcskew-gc-1000.png
GC Skew(cumulative)
window: 1000 bp
cum_gcskew-gc-5000.png
GC Skew(cumulative)
window: 5000 bp
cum_gcskew-gc-10000.png
GC Skew(cumulative)
window: 10000 bp
cum_gcskew-at-1000.png
AT Skew(cumulative)
window: 1000 bp
cum_gcskew-at-5000.png
AT Skew(cumulative)
window: 5000 bp
cum_gcskew-at-10000.png
AT Skew(cumulative)
window: 10000 bp

cum_gcskew-keto-1000.png
Keto Skew(cumulative)
window: 1000 bp
cum_gcskew-keto-5000.png
Keto Skew(cumulative)
window: 5000 bp
cum_gcskew-keto-10000.png
Keto Skew(cumulative)
window: 10000 bp
cum_gcskew-purine-1000.png
Purine Skew(cumulative)
window: 1000 bp
cum_gcskew-purine-5000.png
Purine Skew(cumulative)
window: 5000 bp
cum_gcskew-purine-10000.png
Purine Skew(cumulative)
window: 10000 bp





(C) 2006 Institute for Advanced Biosciences, Keio University