NC_005791: Methanococcus maripaludis S2

ori position (bp) ter position (bp) ori position (bp) ter position (bp)
GC-LowPass10 43133 869333 PURINE-LowPass10 272768 1622633
GC-LowPass20 43133 869333 PURINE-LowPass20 272768 1622633
GC-LowPass50 43133 869333 PURINE-LowPass50 272768 1622633
GC-LowPass90 43133 868523 PURINE-LowPass90 273173 1621823
GC-LowPass95 43538 869333 PURINE-LowPass95 275198 1623443
GC-LowPass99 54068 871763 PURINE-LowPass99 278843 1623848
KETO-LowPass10 1622633 843818 GC ORITER 43388 869537
KETO-LowPass20 1622633 843818 KETO ORITER 1622837 843972
KETO-LowPass50 1622633 843818 PURINE ORITER 273153 1622946
KETO-LowPass90 1623038 843413 INTER GC ORITER 43388 869537
KETO-LowPass95 1624658 842603 INTER KETO ORITER 1622837 843972
KETO-LowPass99 1627898 870143 INTER PURINE ORITER 273153 1622946
NORMGC GC ORITER 43388 869537 CAI GC ORITER 43388 869537
NORMGC KETO ORITER 1622837 843972 CAI KETO ORITER 1622837 879561
NORMGC PURINE ORITER 273153 1622946 CAI PURINE ORITER 273153 1622946



genomicskew.png
GC skew in GC3/non-coding/whole genome
Fourier power spectrum
Fourier Power Spectrum
Fourier power spectrum (1 to 50Hz)
Fourier Power Spectrum (1 to 50Hz)

gcwin-gc-1000.png
GC Content
window: 1000 bp
gcwin-gc-5000.png
GC Content
window: 5000 bp
gcwin-gc-10000.png
GC Content
window: 10000 bp
gcwin-at-1000.png
AT Content
window: 1000 bp
gcwin-at-5000.png
AT Content
window: 5000 bp
gcwin-at-10000.png
AT Content
window: 10000 bp

gcwin-keto-1000.png
Keto Content
window: 1000 bp
gcwin-keto-5000.png
Keto Content
window: 5000 bp
gcwin-keto-10000.png
Keto Content
window: 10000 bp
gcwin-purine-1000.png
Purine Content
window: 1000 bp
gcwin-purine-5000.png
Purine Content
window: 5000 bp
gcwin-purine-10000.png
Purine Content
window: 10000 bp

gcskew-gc-1000.png
GC Skew
window: 1000 bp
gcskew-gc-5000.png
GC Skew
window: 5000 bp
gcskew-gc-10000.png
GC Skew
window: 10000 bp
gcskew-at-1000.png
AT Skew
window: 1000 bp
gcskew-at-5000.png
AT Skew
window: 5000 bp
gcskew-at-10000.png
AT Skew
window: 10000 bp

gcskew-keto-1000.png
Keto Skew
window: 1000 bp
gcskew-keto-5000.png
Keto Skew
window: 5000 bp
gcskew-keto-10000.png
Keto Skew
window: 10000 bp
gcskew-purine-1000.png
Purine Skew
window: 1000 bp
gcskew-purine-5000.png
Purine Skew
window: 5000 bp
gcskew-purine-10000.png
Purine Skew
window: 10000 bp

cum_gcskew-gc-1000.png
GC Skew(cumulative)
window: 1000 bp
cum_gcskew-gc-5000.png
GC Skew(cumulative)
window: 5000 bp
cum_gcskew-gc-10000.png
GC Skew(cumulative)
window: 10000 bp
cum_gcskew-at-1000.png
AT Skew(cumulative)
window: 1000 bp
cum_gcskew-at-5000.png
AT Skew(cumulative)
window: 5000 bp
cum_gcskew-at-10000.png
AT Skew(cumulative)
window: 10000 bp

cum_gcskew-keto-1000.png
Keto Skew(cumulative)
window: 1000 bp
cum_gcskew-keto-5000.png
Keto Skew(cumulative)
window: 5000 bp
cum_gcskew-keto-10000.png
Keto Skew(cumulative)
window: 10000 bp
cum_gcskew-purine-1000.png
Purine Skew(cumulative)
window: 1000 bp
cum_gcskew-purine-5000.png
Purine Skew(cumulative)
window: 5000 bp
cum_gcskew-purine-10000.png
Purine Skew(cumulative)
window: 10000 bp





(C) 2006 Institute for Advanced Biosciences, Keio University