NC_005303: Onion yellows phytoplasma OY-M

ori position (bp) ter position (bp) ori position (bp) ter position (bp)
GC-LowPass10 620235 410445 PURINE-LowPass10 105 733005
GC-LowPass20 620025 410445 PURINE-LowPass20 105 733005
GC-LowPass50 620025 410235 PURINE-LowPass50 105 733005
GC-LowPass90 620025 410025 PURINE-LowPass90 105 732165
GC-LowPass95 620025 409815 PURINE-LowPass95 105 730695
GC-LowPass99 615405 413595 PURINE-LowPass99 105 728595
KETO-LowPass10 727545 44625 GC ORITER 724390 47769
KETO-LowPass20 727335 44415 KETO ORITER 727622 44704
KETO-LowPass50 727335 44415 PURINE ORITER 1 733188
KETO-LowPass90 722505 43785 INTER GC ORITER 724390 47769
KETO-LowPass95 724185 43575 INTER KETO ORITER 727622 44704
KETO-LowPass99 727125 39165 INTER PURINE ORITER 1 733188
NORMGC GC ORITER 724390 47769 CAI GC ORITER 620175 410598
NORMGC KETO ORITER 727622 44704 CAI KETO ORITER 733450 44704
NORMGC PURINE ORITER 1 733188 CAI PURINE ORITER 1 733188



genomicskew.png
GC skew in GC3/non-coding/whole genome
Fourier power spectrum
Fourier Power Spectrum
Fourier power spectrum (1 to 50Hz)
Fourier Power Spectrum (1 to 50Hz)

gcwin-gc-1000.png
GC Content
window: 1000 bp
gcwin-gc-5000.png
GC Content
window: 5000 bp
gcwin-gc-10000.png
GC Content
window: 10000 bp
gcwin-at-1000.png
AT Content
window: 1000 bp
gcwin-at-5000.png
AT Content
window: 5000 bp
gcwin-at-10000.png
AT Content
window: 10000 bp

gcwin-keto-1000.png
Keto Content
window: 1000 bp
gcwin-keto-5000.png
Keto Content
window: 5000 bp
gcwin-keto-10000.png
Keto Content
window: 10000 bp
gcwin-purine-1000.png
Purine Content
window: 1000 bp
gcwin-purine-5000.png
Purine Content
window: 5000 bp
gcwin-purine-10000.png
Purine Content
window: 10000 bp

gcskew-gc-1000.png
GC Skew
window: 1000 bp
gcskew-gc-5000.png
GC Skew
window: 5000 bp
gcskew-gc-10000.png
GC Skew
window: 10000 bp
gcskew-at-1000.png
AT Skew
window: 1000 bp
gcskew-at-5000.png
AT Skew
window: 5000 bp
gcskew-at-10000.png
AT Skew
window: 10000 bp

gcskew-keto-1000.png
Keto Skew
window: 1000 bp
gcskew-keto-5000.png
Keto Skew
window: 5000 bp
gcskew-keto-10000.png
Keto Skew
window: 10000 bp
gcskew-purine-1000.png
Purine Skew
window: 1000 bp
gcskew-purine-5000.png
Purine Skew
window: 5000 bp
gcskew-purine-10000.png
Purine Skew
window: 10000 bp

cum_gcskew-gc-1000.png
GC Skew(cumulative)
window: 1000 bp
cum_gcskew-gc-5000.png
GC Skew(cumulative)
window: 5000 bp
cum_gcskew-gc-10000.png
GC Skew(cumulative)
window: 10000 bp
cum_gcskew-at-1000.png
AT Skew(cumulative)
window: 1000 bp
cum_gcskew-at-5000.png
AT Skew(cumulative)
window: 5000 bp
cum_gcskew-at-10000.png
AT Skew(cumulative)
window: 10000 bp

cum_gcskew-keto-1000.png
Keto Skew(cumulative)
window: 1000 bp
cum_gcskew-keto-5000.png
Keto Skew(cumulative)
window: 5000 bp
cum_gcskew-keto-10000.png
Keto Skew(cumulative)
window: 10000 bp
cum_gcskew-purine-1000.png
Purine Skew(cumulative)
window: 1000 bp
cum_gcskew-purine-5000.png
Purine Skew(cumulative)
window: 5000 bp
cum_gcskew-purine-10000.png
Purine Skew(cumulative)
window: 10000 bp





(C) 2006 Institute for Advanced Biosciences, Keio University