NC_005296: Rhodopseudomonas palustris CGA009

ori position (bp) ter position (bp) ori position (bp) ter position (bp)
GC-LowPass10 336330 3146850 PURINE-LowPass10 566766 3154842
GC-LowPass20 336330 3148182 PURINE-LowPass20 566766 3154842
GC-LowPass50 336330 3148182 PURINE-LowPass50 566766 3154842
GC-LowPass90 337662 3149514 PURINE-LowPass90 568098 3154842
GC-LowPass95 340326 3152178 PURINE-LowPass95 568098 3152178
GC-LowPass99 348318 3130866 PURINE-LowPass99 561438 3114882
KETO-LowPass10 370962 3112218 GC ORITER 337195 3148317
KETO-LowPass20 370962 3112218 KETO ORITER 372626 3113058
KETO-LowPass50 373626 3110886 PURINE ORITER 568282 3155335
KETO-LowPass90 372294 3142854 INTER GC ORITER 337195 3148317
KETO-LowPass95 337662 3117546 INTER KETO ORITER 372626 3113058
KETO-LowPass99 332334 3146850 INTER PURINE ORITER 568282 3155335
NORMGC GC ORITER 326441 3148317 CAI GC ORITER 337195 3148317
NORMGC KETO ORITER 372626 3113058 CAI KETO ORITER 372626 3169047
NORMGC PURINE ORITER 568282 3155335 CAI PURINE ORITER 568282 3155335



genomicskew.png
GC skew in GC3/non-coding/whole genome
Fourier power spectrum
Fourier Power Spectrum
Fourier power spectrum (1 to 50Hz)
Fourier Power Spectrum (1 to 50Hz)

gcwin-gc-1000.png
GC Content
window: 1000 bp
gcwin-gc-5000.png
GC Content
window: 5000 bp
gcwin-gc-10000.png
GC Content
window: 10000 bp
gcwin-at-1000.png
AT Content
window: 1000 bp
gcwin-at-5000.png
AT Content
window: 5000 bp
gcwin-at-10000.png
AT Content
window: 10000 bp

gcwin-keto-1000.png
Keto Content
window: 1000 bp
gcwin-keto-5000.png
Keto Content
window: 5000 bp
gcwin-keto-10000.png
Keto Content
window: 10000 bp
gcwin-purine-1000.png
Purine Content
window: 1000 bp
gcwin-purine-5000.png
Purine Content
window: 5000 bp
gcwin-purine-10000.png
Purine Content
window: 10000 bp

gcskew-gc-1000.png
GC Skew
window: 1000 bp
gcskew-gc-5000.png
GC Skew
window: 5000 bp
gcskew-gc-10000.png
GC Skew
window: 10000 bp
gcskew-at-1000.png
AT Skew
window: 1000 bp
gcskew-at-5000.png
AT Skew
window: 5000 bp
gcskew-at-10000.png
AT Skew
window: 10000 bp

gcskew-keto-1000.png
Keto Skew
window: 1000 bp
gcskew-keto-5000.png
Keto Skew
window: 5000 bp
gcskew-keto-10000.png
Keto Skew
window: 10000 bp
gcskew-purine-1000.png
Purine Skew
window: 1000 bp
gcskew-purine-5000.png
Purine Skew
window: 5000 bp
gcskew-purine-10000.png
Purine Skew
window: 10000 bp

cum_gcskew-gc-1000.png
GC Skew(cumulative)
window: 1000 bp
cum_gcskew-gc-5000.png
GC Skew(cumulative)
window: 5000 bp
cum_gcskew-gc-10000.png
GC Skew(cumulative)
window: 10000 bp
cum_gcskew-at-1000.png
AT Skew(cumulative)
window: 1000 bp
cum_gcskew-at-5000.png
AT Skew(cumulative)
window: 5000 bp
cum_gcskew-at-10000.png
AT Skew(cumulative)
window: 10000 bp

cum_gcskew-keto-1000.png
Keto Skew(cumulative)
window: 1000 bp
cum_gcskew-keto-5000.png
Keto Skew(cumulative)
window: 5000 bp
cum_gcskew-keto-10000.png
Keto Skew(cumulative)
window: 10000 bp
cum_gcskew-purine-1000.png
Purine Skew(cumulative)
window: 1000 bp
cum_gcskew-purine-5000.png
Purine Skew(cumulative)
window: 5000 bp
cum_gcskew-purine-10000.png
Purine Skew(cumulative)
window: 10000 bp





(C) 2006 Institute for Advanced Biosciences, Keio University