NC_005140: Vibrio vulnificus YJ016 chromosome II

ori position (bp) ter position (bp) ori position (bp) ter position (bp)
GC-LowPass10 1854809 881765 PURINE-LowPass10 1854809 889466
GC-LowPass20 1855262 881765 PURINE-LowPass20 1854809 889466
GC-LowPass50 1855262 898526 PURINE-LowPass50 1854809 889466
GC-LowPass90 1855262 895355 PURINE-LowPass90 1855262 889013
GC-LowPass95 1855262 894902 PURINE-LowPass95 1855262 883124
GC-LowPass99 1850732 881312 PURINE-LowPass99 1855262 873611
KETO-LowPass10 2039 963305 GC ORITER 1856388 899015
KETO-LowPass20 1586 963305 KETO ORITER 2057 963921
KETO-LowPass50 2492 963305 PURINE ORITER 1855909 889690
KETO-LowPass90 2039 962399 INTER GC ORITER 1856388 899015
KETO-LowPass95 2039 960587 INTER KETO ORITER 2057 963921
KETO-LowPass99 227 942920 INTER PURINE ORITER 1855909 889690
NORMGC GC ORITER 1855920 900796 CAI GC ORITER 1856388 899015
NORMGC KETO ORITER 2057 963921 CAI KETO ORITER 2057 964854
NORMGC PURINE ORITER 1855909 889690 CAI PURINE ORITER 1855951 889690



genomicskew.png
GC skew in GC3/non-coding/whole genome
Fourier power spectrum
Fourier Power Spectrum
Fourier power spectrum (1 to 50Hz)
Fourier Power Spectrum (1 to 50Hz)

gcwin-gc-1000.png
GC Content
window: 1000 bp
gcwin-gc-5000.png
GC Content
window: 5000 bp
gcwin-gc-10000.png
GC Content
window: 10000 bp
gcwin-at-1000.png
AT Content
window: 1000 bp
gcwin-at-5000.png
AT Content
window: 5000 bp
gcwin-at-10000.png
AT Content
window: 10000 bp

gcwin-keto-1000.png
Keto Content
window: 1000 bp
gcwin-keto-5000.png
Keto Content
window: 5000 bp
gcwin-keto-10000.png
Keto Content
window: 10000 bp
gcwin-purine-1000.png
Purine Content
window: 1000 bp
gcwin-purine-5000.png
Purine Content
window: 5000 bp
gcwin-purine-10000.png
Purine Content
window: 10000 bp

gcskew-gc-1000.png
GC Skew
window: 1000 bp
gcskew-gc-5000.png
GC Skew
window: 5000 bp
gcskew-gc-10000.png
GC Skew
window: 10000 bp
gcskew-at-1000.png
AT Skew
window: 1000 bp
gcskew-at-5000.png
AT Skew
window: 5000 bp
gcskew-at-10000.png
AT Skew
window: 10000 bp

gcskew-keto-1000.png
Keto Skew
window: 1000 bp
gcskew-keto-5000.png
Keto Skew
window: 5000 bp
gcskew-keto-10000.png
Keto Skew
window: 10000 bp
gcskew-purine-1000.png
Purine Skew
window: 1000 bp
gcskew-purine-5000.png
Purine Skew
window: 5000 bp
gcskew-purine-10000.png
Purine Skew
window: 10000 bp

cum_gcskew-gc-1000.png
GC Skew(cumulative)
window: 1000 bp
cum_gcskew-gc-5000.png
GC Skew(cumulative)
window: 5000 bp
cum_gcskew-gc-10000.png
GC Skew(cumulative)
window: 10000 bp
cum_gcskew-at-1000.png
AT Skew(cumulative)
window: 1000 bp
cum_gcskew-at-5000.png
AT Skew(cumulative)
window: 5000 bp
cum_gcskew-at-10000.png
AT Skew(cumulative)
window: 10000 bp

cum_gcskew-keto-1000.png
Keto Skew(cumulative)
window: 1000 bp
cum_gcskew-keto-5000.png
Keto Skew(cumulative)
window: 5000 bp
cum_gcskew-keto-10000.png
Keto Skew(cumulative)
window: 10000 bp
cum_gcskew-purine-1000.png
Purine Skew(cumulative)
window: 1000 bp
cum_gcskew-purine-5000.png
Purine Skew(cumulative)
window: 5000 bp
cum_gcskew-purine-10000.png
Purine Skew(cumulative)
window: 10000 bp





(C) 2006 Institute for Advanced Biosciences, Keio University