NC_004606: Streptococcus pyogenes SSI-1

ori position (bp) ter position (bp) ori position (bp) ter position (bp)
GC-LowPass10 2079 1020789 PURINE-LowPass10 231 1020327
GC-LowPass20 2079 1021251 PURINE-LowPass20 231 1020327
GC-LowPass50 2079 1020789 PURINE-LowPass50 231 1020789
GC-LowPass90 1155 1020789 PURINE-LowPass90 231 1021251
GC-LowPass95 231 1012935 PURINE-LowPass95 231 1018941
GC-LowPass99 231 1014783 PURINE-LowPass99 231 1028181
KETO-LowPass10 12705 998613 GC ORITER 2898 1021176
KETO-LowPass20 12243 998613 KETO ORITER 12348 997479
KETO-LowPass50 12705 997689 PURINE ORITER 38 1020834
KETO-LowPass90 11781 998151 INTER GC ORITER 2898 1021176
KETO-LowPass95 12705 995379 INTER KETO ORITER 12348 997479
KETO-LowPass99 231 1008315 INTER PURINE ORITER 38 1020834
NORMGC GC ORITER 2898 1021176 CAI GC ORITER 2898 1021176
NORMGC KETO ORITER 3398 997479 CAI KETO ORITER 12348 997479
NORMGC PURINE ORITER 38 1020834 CAI PURINE ORITER 38 1020834



genomicskew.png
GC skew in GC3/non-coding/whole genome
Fourier power spectrum
Fourier Power Spectrum
Fourier power spectrum (1 to 50Hz)
Fourier Power Spectrum (1 to 50Hz)

gcwin-gc-1000.png
GC Content
window: 1000 bp
gcwin-gc-5000.png
GC Content
window: 5000 bp
gcwin-gc-10000.png
GC Content
window: 10000 bp
gcwin-at-1000.png
AT Content
window: 1000 bp
gcwin-at-5000.png
AT Content
window: 5000 bp
gcwin-at-10000.png
AT Content
window: 10000 bp

gcwin-keto-1000.png
Keto Content
window: 1000 bp
gcwin-keto-5000.png
Keto Content
window: 5000 bp
gcwin-keto-10000.png
Keto Content
window: 10000 bp
gcwin-purine-1000.png
Purine Content
window: 1000 bp
gcwin-purine-5000.png
Purine Content
window: 5000 bp
gcwin-purine-10000.png
Purine Content
window: 10000 bp

gcskew-gc-1000.png
GC Skew
window: 1000 bp
gcskew-gc-5000.png
GC Skew
window: 5000 bp
gcskew-gc-10000.png
GC Skew
window: 10000 bp
gcskew-at-1000.png
AT Skew
window: 1000 bp
gcskew-at-5000.png
AT Skew
window: 5000 bp
gcskew-at-10000.png
AT Skew
window: 10000 bp

gcskew-keto-1000.png
Keto Skew
window: 1000 bp
gcskew-keto-5000.png
Keto Skew
window: 5000 bp
gcskew-keto-10000.png
Keto Skew
window: 10000 bp
gcskew-purine-1000.png
Purine Skew
window: 1000 bp
gcskew-purine-5000.png
Purine Skew
window: 5000 bp
gcskew-purine-10000.png
Purine Skew
window: 10000 bp

cum_gcskew-gc-1000.png
GC Skew(cumulative)
window: 1000 bp
cum_gcskew-gc-5000.png
GC Skew(cumulative)
window: 5000 bp
cum_gcskew-gc-10000.png
GC Skew(cumulative)
window: 10000 bp
cum_gcskew-at-1000.png
AT Skew(cumulative)
window: 1000 bp
cum_gcskew-at-5000.png
AT Skew(cumulative)
window: 5000 bp
cum_gcskew-at-10000.png
AT Skew(cumulative)
window: 10000 bp

cum_gcskew-keto-1000.png
Keto Skew(cumulative)
window: 1000 bp
cum_gcskew-keto-5000.png
Keto Skew(cumulative)
window: 5000 bp
cum_gcskew-keto-10000.png
Keto Skew(cumulative)
window: 10000 bp
cum_gcskew-purine-1000.png
Purine Skew(cumulative)
window: 1000 bp
cum_gcskew-purine-5000.png
Purine Skew(cumulative)
window: 5000 bp
cum_gcskew-purine-10000.png
Purine Skew(cumulative)
window: 10000 bp





(C) 2006 Institute for Advanced Biosciences, Keio University