NC_004605: Vibrio parahaemolyticus RIMD 2210633 chromosome II

ori position (bp) ter position (bp) ori position (bp) ter position (bp)
GC-LowPass10 1875739 918061 PURINE-LowPass10 1875739 933175
GC-LowPass20 1875739 918061 PURINE-LowPass20 1875739 933633
GC-LowPass50 1875739 917603 PURINE-LowPass50 1875739 933633
GC-LowPass90 1875739 926763 PURINE-LowPass90 1875739 934549
GC-LowPass95 1875739 925389 PURINE-LowPass95 1875739 932717
GC-LowPass99 1870243 920809 PURINE-LowPass99 1864747 920809
KETO-LowPass10 2519 902031 GC ORITER 1877212 927829
KETO-LowPass20 2061 902489 KETO ORITER 2887 902167
KETO-LowPass50 2519 902031 PURINE ORITER 1877122 933563
KETO-LowPass90 2061 915771 INTER GC ORITER 1877212 927829
KETO-LowPass95 5267 902947 INTER KETO ORITER 2887 902167
KETO-LowPass99 229 921725 INTER PURINE ORITER 1877122 933563
NORMGC GC ORITER 1877212 927829 CAI GC ORITER 1877212 918120
NORMGC KETO ORITER 2887 902167 CAI KETO ORITER 2887 902167
NORMGC PURINE ORITER 1877122 933563 CAI PURINE ORITER 1877122 933563



genomicskew.png
GC skew in GC3/non-coding/whole genome
Fourier power spectrum
Fourier Power Spectrum
Fourier power spectrum (1 to 50Hz)
Fourier Power Spectrum (1 to 50Hz)

gcwin-gc-1000.png
GC Content
window: 1000 bp
gcwin-gc-5000.png
GC Content
window: 5000 bp
gcwin-gc-10000.png
GC Content
window: 10000 bp
gcwin-at-1000.png
AT Content
window: 1000 bp
gcwin-at-5000.png
AT Content
window: 5000 bp
gcwin-at-10000.png
AT Content
window: 10000 bp

gcwin-keto-1000.png
Keto Content
window: 1000 bp
gcwin-keto-5000.png
Keto Content
window: 5000 bp
gcwin-keto-10000.png
Keto Content
window: 10000 bp
gcwin-purine-1000.png
Purine Content
window: 1000 bp
gcwin-purine-5000.png
Purine Content
window: 5000 bp
gcwin-purine-10000.png
Purine Content
window: 10000 bp

gcskew-gc-1000.png
GC Skew
window: 1000 bp
gcskew-gc-5000.png
GC Skew
window: 5000 bp
gcskew-gc-10000.png
GC Skew
window: 10000 bp
gcskew-at-1000.png
AT Skew
window: 1000 bp
gcskew-at-5000.png
AT Skew
window: 5000 bp
gcskew-at-10000.png
AT Skew
window: 10000 bp

gcskew-keto-1000.png
Keto Skew
window: 1000 bp
gcskew-keto-5000.png
Keto Skew
window: 5000 bp
gcskew-keto-10000.png
Keto Skew
window: 10000 bp
gcskew-purine-1000.png
Purine Skew
window: 1000 bp
gcskew-purine-5000.png
Purine Skew
window: 5000 bp
gcskew-purine-10000.png
Purine Skew
window: 10000 bp

cum_gcskew-gc-1000.png
GC Skew(cumulative)
window: 1000 bp
cum_gcskew-gc-5000.png
GC Skew(cumulative)
window: 5000 bp
cum_gcskew-gc-10000.png
GC Skew(cumulative)
window: 10000 bp
cum_gcskew-at-1000.png
AT Skew(cumulative)
window: 1000 bp
cum_gcskew-at-5000.png
AT Skew(cumulative)
window: 5000 bp
cum_gcskew-at-10000.png
AT Skew(cumulative)
window: 10000 bp

cum_gcskew-keto-1000.png
Keto Skew(cumulative)
window: 1000 bp
cum_gcskew-keto-5000.png
Keto Skew(cumulative)
window: 5000 bp
cum_gcskew-keto-10000.png
Keto Skew(cumulative)
window: 10000 bp
cum_gcskew-purine-1000.png
Purine Skew(cumulative)
window: 1000 bp
cum_gcskew-purine-5000.png
Purine Skew(cumulative)
window: 5000 bp
cum_gcskew-purine-10000.png
Purine Skew(cumulative)
window: 10000 bp





(C) 2006 Institute for Advanced Biosciences, Keio University