NC_004463: Bradyrhizobium japonicum USDA 110

ori position (bp) ter position (bp) ori position (bp) ter position (bp)
GC-LowPass10 701357 4893935 PURINE-LowPass10 7101374 4893935
GC-LowPass20 699134 4893935 PURINE-LowPass20 7101374 4893935
GC-LowPass50 699134 4891712 PURINE-LowPass50 7099151 4891712
GC-LowPass90 692465 4911719 PURINE-LowPass90 7099151 4900604
GC-LowPass95 690242 4905050 PURINE-LowPass95 7112489 4902827
GC-LowPass99 703580 4938395 PURINE-LowPass99 7116935 4942841
KETO-LowPass10 701357 4925057 GC ORITER 701355 4893740
KETO-LowPass20 701357 4925057 KETO ORITER 702553 4926260
KETO-LowPass50 703580 4925057 PURINE ORITER 7099422 4893657
KETO-LowPass90 694688 4925057 INTER GC ORITER 701355 4893740
KETO-LowPass95 694688 4911719 INTER KETO ORITER 702553 4926260
KETO-LowPass99 725810 4933949 INTER PURINE ORITER 7099422 4893657
NORMGC GC ORITER 701355 4893740 CAI GC ORITER 701355 4893740
NORMGC KETO ORITER 702553 4926260 CAI KETO ORITER 702553 4926260
NORMGC PURINE ORITER 7099422 4893657 CAI PURINE ORITER 7099422 4893657



genomicskew.png
GC skew in GC3/non-coding/whole genome
Fourier power spectrum
Fourier Power Spectrum
Fourier power spectrum (1 to 50Hz)
Fourier Power Spectrum (1 to 50Hz)

gcwin-gc-1000.png
GC Content
window: 1000 bp
gcwin-gc-5000.png
GC Content
window: 5000 bp
gcwin-gc-10000.png
GC Content
window: 10000 bp
gcwin-at-1000.png
AT Content
window: 1000 bp
gcwin-at-5000.png
AT Content
window: 5000 bp
gcwin-at-10000.png
AT Content
window: 10000 bp

gcwin-keto-1000.png
Keto Content
window: 1000 bp
gcwin-keto-5000.png
Keto Content
window: 5000 bp
gcwin-keto-10000.png
Keto Content
window: 10000 bp
gcwin-purine-1000.png
Purine Content
window: 1000 bp
gcwin-purine-5000.png
Purine Content
window: 5000 bp
gcwin-purine-10000.png
Purine Content
window: 10000 bp

gcskew-gc-1000.png
GC Skew
window: 1000 bp
gcskew-gc-5000.png
GC Skew
window: 5000 bp
gcskew-gc-10000.png
GC Skew
window: 10000 bp
gcskew-at-1000.png
AT Skew
window: 1000 bp
gcskew-at-5000.png
AT Skew
window: 5000 bp
gcskew-at-10000.png
AT Skew
window: 10000 bp

gcskew-keto-1000.png
Keto Skew
window: 1000 bp
gcskew-keto-5000.png
Keto Skew
window: 5000 bp
gcskew-keto-10000.png
Keto Skew
window: 10000 bp
gcskew-purine-1000.png
Purine Skew
window: 1000 bp
gcskew-purine-5000.png
Purine Skew
window: 5000 bp
gcskew-purine-10000.png
Purine Skew
window: 10000 bp

cum_gcskew-gc-1000.png
GC Skew(cumulative)
window: 1000 bp
cum_gcskew-gc-5000.png
GC Skew(cumulative)
window: 5000 bp
cum_gcskew-gc-10000.png
GC Skew(cumulative)
window: 10000 bp
cum_gcskew-at-1000.png
AT Skew(cumulative)
window: 1000 bp
cum_gcskew-at-5000.png
AT Skew(cumulative)
window: 5000 bp
cum_gcskew-at-10000.png
AT Skew(cumulative)
window: 10000 bp

cum_gcskew-keto-1000.png
Keto Skew(cumulative)
window: 1000 bp
cum_gcskew-keto-5000.png
Keto Skew(cumulative)
window: 5000 bp
cum_gcskew-keto-10000.png
Keto Skew(cumulative)
window: 10000 bp
cum_gcskew-purine-1000.png
Purine Skew(cumulative)
window: 1000 bp
cum_gcskew-purine-5000.png
Purine Skew(cumulative)
window: 5000 bp
cum_gcskew-purine-10000.png
Purine Skew(cumulative)
window: 10000 bp





(C) 2006 Institute for Advanced Biosciences, Keio University