NC_004460: Vibrio vulnificus CMCP6 chromosome II

ori position (bp) ter position (bp) ori position (bp) ter position (bp)
GC-LowPass10 1275975 305775 PURINE-LowPass10 1271475 313875
GC-LowPass20 1275975 305775 PURINE-LowPass20 1271475 313875
GC-LowPass50 1275975 305775 PURINE-LowPass50 1271475 313875
GC-LowPass90 1274625 310275 PURINE-LowPass90 1274625 313875
GC-LowPass95 1273275 308475 PURINE-LowPass95 1273725 310275
GC-LowPass99 1267425 294075 PURINE-LowPass99 1282725 288675
KETO-LowPass10 1245375 306225 GC ORITER 1275876 306331
KETO-LowPass20 1245375 306225 KETO ORITER 1245614 306391
KETO-LowPass50 1245375 306675 PURINE ORITER 1271593 314139
KETO-LowPass90 1247625 308925 INTER GC ORITER 1275876 306331
KETO-LowPass95 1273275 306225 INTER KETO ORITER 1245614 306391
KETO-LowPass99 1257075 302625 INTER PURINE ORITER 1271593 314139
NORMGC GC ORITER 1275876 306331 CAI GC ORITER 1275876 313654
NORMGC KETO ORITER 1244417 298067 CAI KETO ORITER 1274814 298067
NORMGC PURINE ORITER 1271593 305649 CAI PURINE ORITER 1271593 314139



genomicskew.png
GC skew in GC3/non-coding/whole genome
Fourier power spectrum
Fourier Power Spectrum
Fourier power spectrum (1 to 50Hz)
Fourier Power Spectrum (1 to 50Hz)

gcwin-gc-1000.png
GC Content
window: 1000 bp
gcwin-gc-5000.png
GC Content
window: 5000 bp
gcwin-gc-10000.png
GC Content
window: 10000 bp
gcwin-at-1000.png
AT Content
window: 1000 bp
gcwin-at-5000.png
AT Content
window: 5000 bp
gcwin-at-10000.png
AT Content
window: 10000 bp

gcwin-keto-1000.png
Keto Content
window: 1000 bp
gcwin-keto-5000.png
Keto Content
window: 5000 bp
gcwin-keto-10000.png
Keto Content
window: 10000 bp
gcwin-purine-1000.png
Purine Content
window: 1000 bp
gcwin-purine-5000.png
Purine Content
window: 5000 bp
gcwin-purine-10000.png
Purine Content
window: 10000 bp

gcskew-gc-1000.png
GC Skew
window: 1000 bp
gcskew-gc-5000.png
GC Skew
window: 5000 bp
gcskew-gc-10000.png
GC Skew
window: 10000 bp
gcskew-at-1000.png
AT Skew
window: 1000 bp
gcskew-at-5000.png
AT Skew
window: 5000 bp
gcskew-at-10000.png
AT Skew
window: 10000 bp

gcskew-keto-1000.png
Keto Skew
window: 1000 bp
gcskew-keto-5000.png
Keto Skew
window: 5000 bp
gcskew-keto-10000.png
Keto Skew
window: 10000 bp
gcskew-purine-1000.png
Purine Skew
window: 1000 bp
gcskew-purine-5000.png
Purine Skew
window: 5000 bp
gcskew-purine-10000.png
Purine Skew
window: 10000 bp

cum_gcskew-gc-1000.png
GC Skew(cumulative)
window: 1000 bp
cum_gcskew-gc-5000.png
GC Skew(cumulative)
window: 5000 bp
cum_gcskew-gc-10000.png
GC Skew(cumulative)
window: 10000 bp
cum_gcskew-at-1000.png
AT Skew(cumulative)
window: 1000 bp
cum_gcskew-at-5000.png
AT Skew(cumulative)
window: 5000 bp
cum_gcskew-at-10000.png
AT Skew(cumulative)
window: 10000 bp

cum_gcskew-keto-1000.png
Keto Skew(cumulative)
window: 1000 bp
cum_gcskew-keto-5000.png
Keto Skew(cumulative)
window: 5000 bp
cum_gcskew-keto-10000.png
Keto Skew(cumulative)
window: 10000 bp
cum_gcskew-purine-1000.png
Purine Skew(cumulative)
window: 1000 bp
cum_gcskew-purine-5000.png
Purine Skew(cumulative)
window: 5000 bp
cum_gcskew-purine-10000.png
Purine Skew(cumulative)
window: 10000 bp





(C) 2006 Institute for Advanced Biosciences, Keio University