NC_004431: Escherichia coli CFT073

ori position (bp) ter position (bp) ori position (bp) ter position (bp)
GC-LowPass10 4426721 1769284 PURINE-LowPass10 4433106 1745021
GC-LowPass20 4426721 1769284 PURINE-LowPass20 4433106 1743744
GC-LowPass50 4425444 1769284 PURINE-LowPass50 4433106 1745021
GC-LowPass90 4426721 1760345 PURINE-LowPass90 4430552 1753960
GC-LowPass95 4425444 1760345 PURINE-LowPass95 4425444 1748852
GC-LowPass99 4426721 1774392 PURINE-LowPass99 4259434 1778223
KETO-LowPass10 4426721 1780777 GC ORITER 4426632 1745034
KETO-LowPass20 4424167 1780777 KETO ORITER 4424594 1778162
KETO-LowPass50 4424167 1782054 PURINE ORITER 4434335 1744994
KETO-LowPass90 4422890 1774392 INTER GC ORITER 4426632 1745034
KETO-LowPass95 4425444 1774392 INTER KETO ORITER 4424594 1778162
KETO-LowPass99 4419059 1766730 INTER PURINE ORITER 4434335 1744994
NORMGC GC ORITER 4426632 1745034 CAI GC ORITER 4426632 1745741
NORMGC KETO ORITER 4424594 1778162 CAI KETO ORITER 4424594 1778162
NORMGC PURINE ORITER 4434335 1744994 CAI PURINE ORITER 4434335 1745825



genomicskew.png
GC skew in GC3/non-coding/whole genome
Fourier power spectrum
Fourier Power Spectrum
Fourier power spectrum (1 to 50Hz)
Fourier Power Spectrum (1 to 50Hz)

gcwin-gc-1000.png
GC Content
window: 1000 bp
gcwin-gc-5000.png
GC Content
window: 5000 bp
gcwin-gc-10000.png
GC Content
window: 10000 bp
gcwin-at-1000.png
AT Content
window: 1000 bp
gcwin-at-5000.png
AT Content
window: 5000 bp
gcwin-at-10000.png
AT Content
window: 10000 bp

gcwin-keto-1000.png
Keto Content
window: 1000 bp
gcwin-keto-5000.png
Keto Content
window: 5000 bp
gcwin-keto-10000.png
Keto Content
window: 10000 bp
gcwin-purine-1000.png
Purine Content
window: 1000 bp
gcwin-purine-5000.png
Purine Content
window: 5000 bp
gcwin-purine-10000.png
Purine Content
window: 10000 bp

gcskew-gc-1000.png
GC Skew
window: 1000 bp
gcskew-gc-5000.png
GC Skew
window: 5000 bp
gcskew-gc-10000.png
GC Skew
window: 10000 bp
gcskew-at-1000.png
AT Skew
window: 1000 bp
gcskew-at-5000.png
AT Skew
window: 5000 bp
gcskew-at-10000.png
AT Skew
window: 10000 bp

gcskew-keto-1000.png
Keto Skew
window: 1000 bp
gcskew-keto-5000.png
Keto Skew
window: 5000 bp
gcskew-keto-10000.png
Keto Skew
window: 10000 bp
gcskew-purine-1000.png
Purine Skew
window: 1000 bp
gcskew-purine-5000.png
Purine Skew
window: 5000 bp
gcskew-purine-10000.png
Purine Skew
window: 10000 bp

cum_gcskew-gc-1000.png
GC Skew(cumulative)
window: 1000 bp
cum_gcskew-gc-5000.png
GC Skew(cumulative)
window: 5000 bp
cum_gcskew-gc-10000.png
GC Skew(cumulative)
window: 10000 bp
cum_gcskew-at-1000.png
AT Skew(cumulative)
window: 1000 bp
cum_gcskew-at-5000.png
AT Skew(cumulative)
window: 5000 bp
cum_gcskew-at-10000.png
AT Skew(cumulative)
window: 10000 bp

cum_gcskew-keto-1000.png
Keto Skew(cumulative)
window: 1000 bp
cum_gcskew-keto-5000.png
Keto Skew(cumulative)
window: 5000 bp
cum_gcskew-keto-10000.png
Keto Skew(cumulative)
window: 10000 bp
cum_gcskew-purine-1000.png
Purine Skew(cumulative)
window: 1000 bp
cum_gcskew-purine-5000.png
Purine Skew(cumulative)
window: 5000 bp
cum_gcskew-purine-10000.png
Purine Skew(cumulative)
window: 10000 bp





(C) 2006 Institute for Advanced Biosciences, Keio University