NC_004343: Leptospira interrogans serovar Lai str. 56601 chromosome II

ori position (bp) ter position (bp) ori position (bp) ter position (bp)
GC-LowPass10 305 182744 PURINE-LowPass10 348305 104531
GC-LowPass20 218 176306 PURINE-LowPass20 348305 104531
GC-LowPass50 305 182744 PURINE-LowPass50 348305 104531
GC-LowPass90 131 175784 PURINE-LowPass90 354569 104357
GC-LowPass95 44 175784 PURINE-LowPass95 353264 104444
GC-LowPass99 44 180134 PURINE-LowPass99 349871 105662
KETO-LowPass10 1784 204929 GC ORITER 258 182810
KETO-LowPass20 1784 204929 KETO ORITER 1843 205342
KETO-LowPass50 1784 205364 PURINE ORITER 354725 104559
KETO-LowPass90 1349 205103 INTER GC ORITER 258 182810
KETO-LowPass95 1175 205451 INTER KETO ORITER 1843 205342
KETO-LowPass99 1175 207104 INTER PURINE ORITER 354725 104559
NORMGC GC ORITER 258 182810 CAI GC ORITER 258 182810
NORMGC KETO ORITER 912 205342 CAI KETO ORITER 1843 205342
NORMGC PURINE ORITER 354725 104559 CAI PURINE ORITER 258 104559



genomicskew.png
GC skew in GC3/non-coding/whole genome
Fourier power spectrum
Fourier Power Spectrum
Fourier power spectrum (1 to 50Hz)
Fourier Power Spectrum (1 to 50Hz)

gcwin-gc-1000.png
GC Content
window: 1000 bp
gcwin-gc-5000.png
GC Content
window: 5000 bp
gcwin-gc-10000.png
GC Content
window: 10000 bp
gcwin-at-1000.png
AT Content
window: 1000 bp
gcwin-at-5000.png
AT Content
window: 5000 bp
gcwin-at-10000.png
AT Content
window: 10000 bp

gcwin-keto-1000.png
Keto Content
window: 1000 bp
gcwin-keto-5000.png
Keto Content
window: 5000 bp
gcwin-keto-10000.png
Keto Content
window: 10000 bp
gcwin-purine-1000.png
Purine Content
window: 1000 bp
gcwin-purine-5000.png
Purine Content
window: 5000 bp
gcwin-purine-10000.png
Purine Content
window: 10000 bp

gcskew-gc-1000.png
GC Skew
window: 1000 bp
gcskew-gc-5000.png
GC Skew
window: 5000 bp
gcskew-gc-10000.png
GC Skew
window: 10000 bp
gcskew-at-1000.png
AT Skew
window: 1000 bp
gcskew-at-5000.png
AT Skew
window: 5000 bp
gcskew-at-10000.png
AT Skew
window: 10000 bp

gcskew-keto-1000.png
Keto Skew
window: 1000 bp
gcskew-keto-5000.png
Keto Skew
window: 5000 bp
gcskew-keto-10000.png
Keto Skew
window: 10000 bp
gcskew-purine-1000.png
Purine Skew
window: 1000 bp
gcskew-purine-5000.png
Purine Skew
window: 5000 bp
gcskew-purine-10000.png
Purine Skew
window: 10000 bp

cum_gcskew-gc-1000.png
GC Skew(cumulative)
window: 1000 bp
cum_gcskew-gc-5000.png
GC Skew(cumulative)
window: 5000 bp
cum_gcskew-gc-10000.png
GC Skew(cumulative)
window: 10000 bp
cum_gcskew-at-1000.png
AT Skew(cumulative)
window: 1000 bp
cum_gcskew-at-5000.png
AT Skew(cumulative)
window: 5000 bp
cum_gcskew-at-10000.png
AT Skew(cumulative)
window: 10000 bp

cum_gcskew-keto-1000.png
Keto Skew(cumulative)
window: 1000 bp
cum_gcskew-keto-5000.png
Keto Skew(cumulative)
window: 5000 bp
cum_gcskew-keto-10000.png
Keto Skew(cumulative)
window: 10000 bp
cum_gcskew-purine-1000.png
Purine Skew(cumulative)
window: 1000 bp
cum_gcskew-purine-5000.png
Purine Skew(cumulative)
window: 5000 bp
cum_gcskew-purine-10000.png
Purine Skew(cumulative)
window: 10000 bp





(C) 2006 Institute for Advanced Biosciences, Keio University