NC_004070: Streptococcus pyogenes MGAS315

ori position (bp) ter position (bp) ori position (bp) ter position (bp)
GC-LowPass10 1895754 890118 PURINE-LowPass10 1895754 890118
GC-LowPass20 1895754 889655 PURINE-LowPass20 1895754 890118
GC-LowPass50 1895291 890118 PURINE-LowPass50 1895291 890118
GC-LowPass90 1896217 890118 PURINE-LowPass90 1896217 890581
GC-LowPass95 1896217 885025 PURINE-LowPass95 1896217 887803
GC-LowPass99 1886031 885025 PURINE-LowPass99 1883716 902619
KETO-LowPass10 12733 867894 GC ORITER 1898700 890656
KETO-LowPass20 12733 867894 KETO ORITER 12348 866959
KETO-LowPass50 12733 867431 PURINE ORITER 1898700 890314
KETO-LowPass90 12270 866968 INTER GC ORITER 1898700 890656
KETO-LowPass95 232 863727 INTER KETO ORITER 12348 866959
KETO-LowPass99 232 874839 INTER PURINE ORITER 1898700 890314
NORMGC GC ORITER 1898700 890656 CAI GC ORITER 1898700 890656
NORMGC KETO ORITER 3398 864476 CAI KETO ORITER 12348 866959
NORMGC PURINE ORITER 1898700 890314 CAI PURINE ORITER 1898700 890314



genomicskew.png
GC skew in GC3/non-coding/whole genome
Fourier power spectrum
Fourier Power Spectrum
Fourier power spectrum (1 to 50Hz)
Fourier Power Spectrum (1 to 50Hz)

gcwin-gc-1000.png
GC Content
window: 1000 bp
gcwin-gc-5000.png
GC Content
window: 5000 bp
gcwin-gc-10000.png
GC Content
window: 10000 bp
gcwin-at-1000.png
AT Content
window: 1000 bp
gcwin-at-5000.png
AT Content
window: 5000 bp
gcwin-at-10000.png
AT Content
window: 10000 bp

gcwin-keto-1000.png
Keto Content
window: 1000 bp
gcwin-keto-5000.png
Keto Content
window: 5000 bp
gcwin-keto-10000.png
Keto Content
window: 10000 bp
gcwin-purine-1000.png
Purine Content
window: 1000 bp
gcwin-purine-5000.png
Purine Content
window: 5000 bp
gcwin-purine-10000.png
Purine Content
window: 10000 bp

gcskew-gc-1000.png
GC Skew
window: 1000 bp
gcskew-gc-5000.png
GC Skew
window: 5000 bp
gcskew-gc-10000.png
GC Skew
window: 10000 bp
gcskew-at-1000.png
AT Skew
window: 1000 bp
gcskew-at-5000.png
AT Skew
window: 5000 bp
gcskew-at-10000.png
AT Skew
window: 10000 bp

gcskew-keto-1000.png
Keto Skew
window: 1000 bp
gcskew-keto-5000.png
Keto Skew
window: 5000 bp
gcskew-keto-10000.png
Keto Skew
window: 10000 bp
gcskew-purine-1000.png
Purine Skew
window: 1000 bp
gcskew-purine-5000.png
Purine Skew
window: 5000 bp
gcskew-purine-10000.png
Purine Skew
window: 10000 bp

cum_gcskew-gc-1000.png
GC Skew(cumulative)
window: 1000 bp
cum_gcskew-gc-5000.png
GC Skew(cumulative)
window: 5000 bp
cum_gcskew-gc-10000.png
GC Skew(cumulative)
window: 10000 bp
cum_gcskew-at-1000.png
AT Skew(cumulative)
window: 1000 bp
cum_gcskew-at-5000.png
AT Skew(cumulative)
window: 5000 bp
cum_gcskew-at-10000.png
AT Skew(cumulative)
window: 10000 bp

cum_gcskew-keto-1000.png
Keto Skew(cumulative)
window: 1000 bp
cum_gcskew-keto-5000.png
Keto Skew(cumulative)
window: 5000 bp
cum_gcskew-keto-10000.png
Keto Skew(cumulative)
window: 10000 bp
cum_gcskew-purine-1000.png
Purine Skew(cumulative)
window: 1000 bp
cum_gcskew-purine-5000.png
Purine Skew(cumulative)
window: 5000 bp
cum_gcskew-purine-10000.png
Purine Skew(cumulative)
window: 10000 bp





(C) 2006 Institute for Advanced Biosciences, Keio University