NC_003902: Xanthomonas campestris pv. campestris str. ATCC 33913

ori position (bp) ter position (bp) ori position (bp) ter position (bp)
GC-LowPass10 260810 2442689 PURINE-LowPass10 260810 2482337
GC-LowPass20 260810 2442689 PURINE-LowPass20 260810 2482337
GC-LowPass50 259571 2441450 PURINE-LowPass50 260810 2483576
GC-LowPass90 255854 2440211 PURINE-LowPass90 255854 2435255
GC-LowPass95 240986 2442689 PURINE-LowPass95 253376 2447645
GC-LowPass99 620 2430299 PURINE-LowPass99 255854 2467469
KETO-LowPass10 4950425 2442689 GC ORITER 261289 2442204
KETO-LowPass20 4950425 2442689 KETO ORITER 4950877 2442375
KETO-LowPass50 4949186 2441450 PURINE ORITER 261289 2482648
KETO-LowPass90 4997507 2441450 INTER GC ORITER 261289 2442204
KETO-LowPass95 4936796 2442689 INTER KETO ORITER 4950877 2442375
KETO-LowPass99 4970249 2409236 INTER PURINE ORITER 261289 2482648
NORMGC GC ORITER 261289 2442204 CAI GC ORITER 5002672 2441331
NORMGC KETO ORITER 4944945 2442375 CAI KETO ORITER 5006481 2441326
NORMGC PURINE ORITER 261289 2442204 CAI PURINE ORITER 261289 2434788



genomicskew.png
GC skew in GC3/non-coding/whole genome
Fourier power spectrum
Fourier Power Spectrum
Fourier power spectrum (1 to 50Hz)
Fourier Power Spectrum (1 to 50Hz)

gcwin-gc-1000.png
GC Content
window: 1000 bp
gcwin-gc-5000.png
GC Content
window: 5000 bp
gcwin-gc-10000.png
GC Content
window: 10000 bp
gcwin-at-1000.png
AT Content
window: 1000 bp
gcwin-at-5000.png
AT Content
window: 5000 bp
gcwin-at-10000.png
AT Content
window: 10000 bp

gcwin-keto-1000.png
Keto Content
window: 1000 bp
gcwin-keto-5000.png
Keto Content
window: 5000 bp
gcwin-keto-10000.png
Keto Content
window: 10000 bp
gcwin-purine-1000.png
Purine Content
window: 1000 bp
gcwin-purine-5000.png
Purine Content
window: 5000 bp
gcwin-purine-10000.png
Purine Content
window: 10000 bp

gcskew-gc-1000.png
GC Skew
window: 1000 bp
gcskew-gc-5000.png
GC Skew
window: 5000 bp
gcskew-gc-10000.png
GC Skew
window: 10000 bp
gcskew-at-1000.png
AT Skew
window: 1000 bp
gcskew-at-5000.png
AT Skew
window: 5000 bp
gcskew-at-10000.png
AT Skew
window: 10000 bp

gcskew-keto-1000.png
Keto Skew
window: 1000 bp
gcskew-keto-5000.png
Keto Skew
window: 5000 bp
gcskew-keto-10000.png
Keto Skew
window: 10000 bp
gcskew-purine-1000.png
Purine Skew
window: 1000 bp
gcskew-purine-5000.png
Purine Skew
window: 5000 bp
gcskew-purine-10000.png
Purine Skew
window: 10000 bp

cum_gcskew-gc-1000.png
GC Skew(cumulative)
window: 1000 bp
cum_gcskew-gc-5000.png
GC Skew(cumulative)
window: 5000 bp
cum_gcskew-gc-10000.png
GC Skew(cumulative)
window: 10000 bp
cum_gcskew-at-1000.png
AT Skew(cumulative)
window: 1000 bp
cum_gcskew-at-5000.png
AT Skew(cumulative)
window: 5000 bp
cum_gcskew-at-10000.png
AT Skew(cumulative)
window: 10000 bp

cum_gcskew-keto-1000.png
Keto Skew(cumulative)
window: 1000 bp
cum_gcskew-keto-5000.png
Keto Skew(cumulative)
window: 5000 bp
cum_gcskew-keto-10000.png
Keto Skew(cumulative)
window: 10000 bp
cum_gcskew-purine-1000.png
Purine Skew(cumulative)
window: 1000 bp
cum_gcskew-purine-5000.png
Purine Skew(cumulative)
window: 5000 bp
cum_gcskew-purine-10000.png
Purine Skew(cumulative)
window: 10000 bp





(C) 2006 Institute for Advanced Biosciences, Keio University