NC_003485: Streptococcus pyogenes MGAS8232

ori position (bp) ter position (bp) ori position (bp) ter position (bp)
GC-LowPass10 2079 954261 PURINE-LowPass10 1892121 954261
GC-LowPass20 2079 954261 PURINE-LowPass20 1892121 954261
GC-LowPass50 2079 954261 PURINE-LowPass50 1892121 954261
GC-LowPass90 693 954261 PURINE-LowPass90 1892121 954261
GC-LowPass95 231 949641 PURINE-LowPass95 1892121 954261
GC-LowPass99 231 948717 PURINE-LowPass99 1875951 958881
KETO-LowPass10 12705 932085 GC ORITER 2865 954764
KETO-LowPass20 12243 932085 KETO ORITER 13164 931000
KETO-LowPass50 12705 931623 PURINE ORITER 1893196 954416
KETO-LowPass90 12243 928851 INTER GC ORITER 2865 954764
KETO-LowPass95 231 929313 INTER KETO ORITER 13164 931000
KETO-LowPass99 231 945945 INTER PURINE ORITER 1893196 954416
NORMGC GC ORITER 2865 954764 CAI GC ORITER 2865 954764
NORMGC KETO ORITER 3365 931000 CAI KETO ORITER 13164 931000
NORMGC PURINE ORITER 1893196 954416 CAI PURINE ORITER 38 954416



genomicskew.png
GC skew in GC3/non-coding/whole genome
Fourier power spectrum
Fourier Power Spectrum
Fourier power spectrum (1 to 50Hz)
Fourier Power Spectrum (1 to 50Hz)

gcwin-gc-1000.png
GC Content
window: 1000 bp
gcwin-gc-5000.png
GC Content
window: 5000 bp
gcwin-gc-10000.png
GC Content
window: 10000 bp
gcwin-at-1000.png
AT Content
window: 1000 bp
gcwin-at-5000.png
AT Content
window: 5000 bp
gcwin-at-10000.png
AT Content
window: 10000 bp

gcwin-keto-1000.png
Keto Content
window: 1000 bp
gcwin-keto-5000.png
Keto Content
window: 5000 bp
gcwin-keto-10000.png
Keto Content
window: 10000 bp
gcwin-purine-1000.png
Purine Content
window: 1000 bp
gcwin-purine-5000.png
Purine Content
window: 5000 bp
gcwin-purine-10000.png
Purine Content
window: 10000 bp

gcskew-gc-1000.png
GC Skew
window: 1000 bp
gcskew-gc-5000.png
GC Skew
window: 5000 bp
gcskew-gc-10000.png
GC Skew
window: 10000 bp
gcskew-at-1000.png
AT Skew
window: 1000 bp
gcskew-at-5000.png
AT Skew
window: 5000 bp
gcskew-at-10000.png
AT Skew
window: 10000 bp

gcskew-keto-1000.png
Keto Skew
window: 1000 bp
gcskew-keto-5000.png
Keto Skew
window: 5000 bp
gcskew-keto-10000.png
Keto Skew
window: 10000 bp
gcskew-purine-1000.png
Purine Skew
window: 1000 bp
gcskew-purine-5000.png
Purine Skew
window: 5000 bp
gcskew-purine-10000.png
Purine Skew
window: 10000 bp

cum_gcskew-gc-1000.png
GC Skew(cumulative)
window: 1000 bp
cum_gcskew-gc-5000.png
GC Skew(cumulative)
window: 5000 bp
cum_gcskew-gc-10000.png
GC Skew(cumulative)
window: 10000 bp
cum_gcskew-at-1000.png
AT Skew(cumulative)
window: 1000 bp
cum_gcskew-at-5000.png
AT Skew(cumulative)
window: 5000 bp
cum_gcskew-at-10000.png
AT Skew(cumulative)
window: 10000 bp

cum_gcskew-keto-1000.png
Keto Skew(cumulative)
window: 1000 bp
cum_gcskew-keto-5000.png
Keto Skew(cumulative)
window: 5000 bp
cum_gcskew-keto-10000.png
Keto Skew(cumulative)
window: 10000 bp
cum_gcskew-purine-1000.png
Purine Skew(cumulative)
window: 1000 bp
cum_gcskew-purine-5000.png
Purine Skew(cumulative)
window: 5000 bp
cum_gcskew-purine-10000.png
Purine Skew(cumulative)
window: 10000 bp





(C) 2006 Institute for Advanced Biosciences, Keio University