NC_003304: Agrobacterium tumefaciens str. C58 chromosome circular

ori position (bp) ter position (bp) ori position (bp) ter position (bp)
GC-LowPass10 2837489 1486139 PURINE-LowPass10 2800760 1254677
GC-LowPass20 2838182 1486139 PURINE-LowPass20 2800760 1254677
GC-LowPass50 2838182 1486832 PURINE-LowPass50 2800760 1254677
GC-LowPass90 2838182 1484753 PURINE-LowPass90 2797295 1260221
GC-LowPass95 2838182 1486832 PURINE-LowPass95 2797988 1256756
GC-LowPass99 2838182 1461884 PURINE-LowPass99 2804918 1487525
KETO-LowPass10 2838182 1402979 GC ORITER 2841313 1487722
KETO-LowPass20 2838182 1405058 KETO ORITER 2841481 1405759
KETO-LowPass50 2838182 1404365 PURINE ORITER 2801165 1486119
KETO-LowPass90 2838182 1402979 INTER GC ORITER 2841313 1487722
KETO-LowPass95 2838182 1396049 INTER KETO ORITER 2841481 1405759
KETO-LowPass99 2838182 1443866 INTER PURINE ORITER 2801165 1486119
NORMGC GC ORITER 2841313 1487722 CAI GC ORITER 2841313 1487722
NORMGC KETO ORITER 2841481 1405759 CAI KETO ORITER 2841481 1405759
NORMGC PURINE ORITER 2801165 1486119 CAI PURINE ORITER 2797063 1486119



genomicskew.png
GC skew in GC3/non-coding/whole genome
Fourier power spectrum
Fourier Power Spectrum
Fourier power spectrum (1 to 50Hz)
Fourier Power Spectrum (1 to 50Hz)

gcwin-gc-1000.png
GC Content
window: 1000 bp
gcwin-gc-5000.png
GC Content
window: 5000 bp
gcwin-gc-10000.png
GC Content
window: 10000 bp
gcwin-at-1000.png
AT Content
window: 1000 bp
gcwin-at-5000.png
AT Content
window: 5000 bp
gcwin-at-10000.png
AT Content
window: 10000 bp

gcwin-keto-1000.png
Keto Content
window: 1000 bp
gcwin-keto-5000.png
Keto Content
window: 5000 bp
gcwin-keto-10000.png
Keto Content
window: 10000 bp
gcwin-purine-1000.png
Purine Content
window: 1000 bp
gcwin-purine-5000.png
Purine Content
window: 5000 bp
gcwin-purine-10000.png
Purine Content
window: 10000 bp

gcskew-gc-1000.png
GC Skew
window: 1000 bp
gcskew-gc-5000.png
GC Skew
window: 5000 bp
gcskew-gc-10000.png
GC Skew
window: 10000 bp
gcskew-at-1000.png
AT Skew
window: 1000 bp
gcskew-at-5000.png
AT Skew
window: 5000 bp
gcskew-at-10000.png
AT Skew
window: 10000 bp

gcskew-keto-1000.png
Keto Skew
window: 1000 bp
gcskew-keto-5000.png
Keto Skew
window: 5000 bp
gcskew-keto-10000.png
Keto Skew
window: 10000 bp
gcskew-purine-1000.png
Purine Skew
window: 1000 bp
gcskew-purine-5000.png
Purine Skew
window: 5000 bp
gcskew-purine-10000.png
Purine Skew
window: 10000 bp

cum_gcskew-gc-1000.png
GC Skew(cumulative)
window: 1000 bp
cum_gcskew-gc-5000.png
GC Skew(cumulative)
window: 5000 bp
cum_gcskew-gc-10000.png
GC Skew(cumulative)
window: 10000 bp
cum_gcskew-at-1000.png
AT Skew(cumulative)
window: 1000 bp
cum_gcskew-at-5000.png
AT Skew(cumulative)
window: 5000 bp
cum_gcskew-at-10000.png
AT Skew(cumulative)
window: 10000 bp

cum_gcskew-keto-1000.png
Keto Skew(cumulative)
window: 1000 bp
cum_gcskew-keto-5000.png
Keto Skew(cumulative)
window: 5000 bp
cum_gcskew-keto-10000.png
Keto Skew(cumulative)
window: 10000 bp
cum_gcskew-purine-1000.png
Purine Skew(cumulative)
window: 1000 bp
cum_gcskew-purine-5000.png
Purine Skew(cumulative)
window: 5000 bp
cum_gcskew-purine-10000.png
Purine Skew(cumulative)
window: 10000 bp





(C) 2006 Institute for Advanced Biosciences, Keio University