NC_003198: Salmonella enterica subsp. enterica serovar Typhi str. CT18

ori position (bp) ter position (bp) ori position (bp) ter position (bp)
GC-LowPass10 3764431 1464565 PURINE-LowPass10 3757387 1468087
GC-LowPass20 3764431 1464565 PURINE-LowPass20 3757387 1468087
GC-LowPass50 3765605 1465739 PURINE-LowPass50 3757387 1468087
GC-LowPass90 3764431 1438737 PURINE-LowPass90 3759735 1439911
GC-LowPass95 3764431 1459869 PURINE-LowPass95 3764431 1455173
GC-LowPass99 3752691 1476305 PURINE-LowPass99 3750343 1485697
KETO-LowPass10 3764431 1486871 GC ORITER 3764857 1465320
KETO-LowPass20 3764431 1485697 KETO ORITER 3765435 1486509
KETO-LowPass50 3765605 1486871 PURINE ORITER 3757390 1469270
KETO-LowPass90 3766779 1489219 INTER GC ORITER 3764857 1465320
KETO-LowPass95 3763257 1479827 INTER KETO ORITER 3765435 1486509
KETO-LowPass99 3749169 1468087 INTER PURINE ORITER 3757390 1469270
NORMGC GC ORITER 3764857 1486543 CAI GC ORITER 3764857 1486096
NORMGC KETO ORITER 3765435 1486509 CAI KETO ORITER 3765435 1487929
NORMGC PURINE ORITER 3757390 1469270 CAI PURINE ORITER 3757390 1489732



genomicskew.png
GC skew in GC3/non-coding/whole genome
Fourier power spectrum
Fourier Power Spectrum
Fourier power spectrum (1 to 50Hz)
Fourier Power Spectrum (1 to 50Hz)

gcwin-gc-1000.png
GC Content
window: 1000 bp
gcwin-gc-5000.png
GC Content
window: 5000 bp
gcwin-gc-10000.png
GC Content
window: 10000 bp
gcwin-at-1000.png
AT Content
window: 1000 bp
gcwin-at-5000.png
AT Content
window: 5000 bp
gcwin-at-10000.png
AT Content
window: 10000 bp

gcwin-keto-1000.png
Keto Content
window: 1000 bp
gcwin-keto-5000.png
Keto Content
window: 5000 bp
gcwin-keto-10000.png
Keto Content
window: 10000 bp
gcwin-purine-1000.png
Purine Content
window: 1000 bp
gcwin-purine-5000.png
Purine Content
window: 5000 bp
gcwin-purine-10000.png
Purine Content
window: 10000 bp

gcskew-gc-1000.png
GC Skew
window: 1000 bp
gcskew-gc-5000.png
GC Skew
window: 5000 bp
gcskew-gc-10000.png
GC Skew
window: 10000 bp
gcskew-at-1000.png
AT Skew
window: 1000 bp
gcskew-at-5000.png
AT Skew
window: 5000 bp
gcskew-at-10000.png
AT Skew
window: 10000 bp

gcskew-keto-1000.png
Keto Skew
window: 1000 bp
gcskew-keto-5000.png
Keto Skew
window: 5000 bp
gcskew-keto-10000.png
Keto Skew
window: 10000 bp
gcskew-purine-1000.png
Purine Skew
window: 1000 bp
gcskew-purine-5000.png
Purine Skew
window: 5000 bp
gcskew-purine-10000.png
Purine Skew
window: 10000 bp

cum_gcskew-gc-1000.png
GC Skew(cumulative)
window: 1000 bp
cum_gcskew-gc-5000.png
GC Skew(cumulative)
window: 5000 bp
cum_gcskew-gc-10000.png
GC Skew(cumulative)
window: 10000 bp
cum_gcskew-at-1000.png
AT Skew(cumulative)
window: 1000 bp
cum_gcskew-at-5000.png
AT Skew(cumulative)
window: 5000 bp
cum_gcskew-at-10000.png
AT Skew(cumulative)
window: 10000 bp

cum_gcskew-keto-1000.png
Keto Skew(cumulative)
window: 1000 bp
cum_gcskew-keto-5000.png
Keto Skew(cumulative)
window: 5000 bp
cum_gcskew-keto-10000.png
Keto Skew(cumulative)
window: 10000 bp
cum_gcskew-purine-1000.png
Purine Skew(cumulative)
window: 1000 bp
cum_gcskew-purine-5000.png
Purine Skew(cumulative)
window: 5000 bp
cum_gcskew-purine-10000.png
Purine Skew(cumulative)
window: 10000 bp





(C) 2006 Institute for Advanced Biosciences, Keio University