NC_003098: Streptococcus pneumoniae R6

ori position (bp) ter position (bp) ori position (bp) ter position (bp)
GC-LowPass10 2237 1039476 PURINE-LowPass10 249 1037985
GC-LowPass20 2237 1039476 PURINE-LowPass20 249 1037985
GC-LowPass50 1740 1039476 PURINE-LowPass50 249 1037985
GC-LowPass90 1243 1038482 PURINE-LowPass90 249 1038979
GC-LowPass95 249 1039476 PURINE-LowPass95 249 1040470
GC-LowPass99 249 1033512 PURINE-LowPass99 249 1040470
KETO-LowPass10 2237 1022578 GC ORITER 2380 1039963
KETO-LowPass20 2237 1022578 KETO ORITER 3579 1022740
KETO-LowPass50 2237 1022578 PURINE ORITER 1 1038454
KETO-LowPass90 3728 1023075 INTER GC ORITER 2380 1039963
KETO-LowPass95 11680 1021584 INTER KETO ORITER 3579 1022740
KETO-LowPass99 746 1025063 INTER PURINE ORITER 1 1038454
NORMGC GC ORITER 2380 1039963 CAI GC ORITER 2380 1039963
NORMGC KETO ORITER 2038402 1022740 CAI KETO ORITER 3579 1022740
NORMGC PURINE ORITER 1 1038454 CAI PURINE ORITER 1 1038454



genomicskew.png
GC skew in GC3/non-coding/whole genome
Fourier power spectrum
Fourier Power Spectrum
Fourier power spectrum (1 to 50Hz)
Fourier Power Spectrum (1 to 50Hz)

gcwin-gc-1000.png
GC Content
window: 1000 bp
gcwin-gc-5000.png
GC Content
window: 5000 bp
gcwin-gc-10000.png
GC Content
window: 10000 bp
gcwin-at-1000.png
AT Content
window: 1000 bp
gcwin-at-5000.png
AT Content
window: 5000 bp
gcwin-at-10000.png
AT Content
window: 10000 bp

gcwin-keto-1000.png
Keto Content
window: 1000 bp
gcwin-keto-5000.png
Keto Content
window: 5000 bp
gcwin-keto-10000.png
Keto Content
window: 10000 bp
gcwin-purine-1000.png
Purine Content
window: 1000 bp
gcwin-purine-5000.png
Purine Content
window: 5000 bp
gcwin-purine-10000.png
Purine Content
window: 10000 bp

gcskew-gc-1000.png
GC Skew
window: 1000 bp
gcskew-gc-5000.png
GC Skew
window: 5000 bp
gcskew-gc-10000.png
GC Skew
window: 10000 bp
gcskew-at-1000.png
AT Skew
window: 1000 bp
gcskew-at-5000.png
AT Skew
window: 5000 bp
gcskew-at-10000.png
AT Skew
window: 10000 bp

gcskew-keto-1000.png
Keto Skew
window: 1000 bp
gcskew-keto-5000.png
Keto Skew
window: 5000 bp
gcskew-keto-10000.png
Keto Skew
window: 10000 bp
gcskew-purine-1000.png
Purine Skew
window: 1000 bp
gcskew-purine-5000.png
Purine Skew
window: 5000 bp
gcskew-purine-10000.png
Purine Skew
window: 10000 bp

cum_gcskew-gc-1000.png
GC Skew(cumulative)
window: 1000 bp
cum_gcskew-gc-5000.png
GC Skew(cumulative)
window: 5000 bp
cum_gcskew-gc-10000.png
GC Skew(cumulative)
window: 10000 bp
cum_gcskew-at-1000.png
AT Skew(cumulative)
window: 1000 bp
cum_gcskew-at-5000.png
AT Skew(cumulative)
window: 5000 bp
cum_gcskew-at-10000.png
AT Skew(cumulative)
window: 10000 bp

cum_gcskew-keto-1000.png
Keto Skew(cumulative)
window: 1000 bp
cum_gcskew-keto-5000.png
Keto Skew(cumulative)
window: 5000 bp
cum_gcskew-keto-10000.png
Keto Skew(cumulative)
window: 10000 bp
cum_gcskew-purine-1000.png
Purine Skew(cumulative)
window: 1000 bp
cum_gcskew-purine-5000.png
Purine Skew(cumulative)
window: 5000 bp
cum_gcskew-purine-10000.png
Purine Skew(cumulative)
window: 10000 bp





(C) 2006 Institute for Advanced Biosciences, Keio University