NC_002973: Listeria monocytogenes str. 4b F2365

ori position (bp) ter position (bp) ori position (bp) ter position (bp)
GC-LowPass10 2903710 1423318 PURINE-LowPass10 2903710 1421900
GC-LowPass20 2903710 1423318 PURINE-LowPass20 2903710 1427572
GC-LowPass50 2903710 1423318 PURINE-LowPass50 2903710 1418355
GC-LowPass90 2903710 1426863 PURINE-LowPass90 2903710 1418355
GC-LowPass95 2903710 1428281 PURINE-LowPass95 2903710 1425445
GC-LowPass99 2903710 1441043 PURINE-LowPass99 2903710 1432535
KETO-LowPass10 2902292 364781 GC ORITER 2905078 1423382
KETO-LowPass20 2902292 364072 KETO ORITER 2902288 364705
KETO-LowPass50 2902292 364072 PURINE ORITER 2905156 1422064
KETO-LowPass90 2903710 361945 INTER GC ORITER 2905078 1423382
KETO-LowPass95 2903710 362654 INTER KETO ORITER 2902288 364705
KETO-LowPass99 2903710 388887 INTER PURINE ORITER 2905156 1422064
NORMGC GC ORITER 2905078 1423382 CAI GC ORITER 2905078 1423382
NORMGC KETO ORITER 2902288 66841 CAI KETO ORITER 2902288 66841
NORMGC PURINE ORITER 2905156 1436281 CAI PURINE ORITER 2905156 1422064



genomicskew.png
GC skew in GC3/non-coding/whole genome
Fourier power spectrum
Fourier Power Spectrum
Fourier power spectrum (1 to 50Hz)
Fourier Power Spectrum (1 to 50Hz)

gcwin-gc-1000.png
GC Content
window: 1000 bp
gcwin-gc-5000.png
GC Content
window: 5000 bp
gcwin-gc-10000.png
GC Content
window: 10000 bp
gcwin-at-1000.png
AT Content
window: 1000 bp
gcwin-at-5000.png
AT Content
window: 5000 bp
gcwin-at-10000.png
AT Content
window: 10000 bp

gcwin-keto-1000.png
Keto Content
window: 1000 bp
gcwin-keto-5000.png
Keto Content
window: 5000 bp
gcwin-keto-10000.png
Keto Content
window: 10000 bp
gcwin-purine-1000.png
Purine Content
window: 1000 bp
gcwin-purine-5000.png
Purine Content
window: 5000 bp
gcwin-purine-10000.png
Purine Content
window: 10000 bp

gcskew-gc-1000.png
GC Skew
window: 1000 bp
gcskew-gc-5000.png
GC Skew
window: 5000 bp
gcskew-gc-10000.png
GC Skew
window: 10000 bp
gcskew-at-1000.png
AT Skew
window: 1000 bp
gcskew-at-5000.png
AT Skew
window: 5000 bp
gcskew-at-10000.png
AT Skew
window: 10000 bp

gcskew-keto-1000.png
Keto Skew
window: 1000 bp
gcskew-keto-5000.png
Keto Skew
window: 5000 bp
gcskew-keto-10000.png
Keto Skew
window: 10000 bp
gcskew-purine-1000.png
Purine Skew
window: 1000 bp
gcskew-purine-5000.png
Purine Skew
window: 5000 bp
gcskew-purine-10000.png
Purine Skew
window: 10000 bp

cum_gcskew-gc-1000.png
GC Skew(cumulative)
window: 1000 bp
cum_gcskew-gc-5000.png
GC Skew(cumulative)
window: 5000 bp
cum_gcskew-gc-10000.png
GC Skew(cumulative)
window: 10000 bp
cum_gcskew-at-1000.png
AT Skew(cumulative)
window: 1000 bp
cum_gcskew-at-5000.png
AT Skew(cumulative)
window: 5000 bp
cum_gcskew-at-10000.png
AT Skew(cumulative)
window: 10000 bp

cum_gcskew-keto-1000.png
Keto Skew(cumulative)
window: 1000 bp
cum_gcskew-keto-5000.png
Keto Skew(cumulative)
window: 5000 bp
cum_gcskew-keto-10000.png
Keto Skew(cumulative)
window: 10000 bp
cum_gcskew-purine-1000.png
Purine Skew(cumulative)
window: 1000 bp
cum_gcskew-purine-5000.png
Purine Skew(cumulative)
window: 5000 bp
cum_gcskew-purine-10000.png
Purine Skew(cumulative)
window: 10000 bp





(C) 2006 Institute for Advanced Biosciences, Keio University