NC_002967: Treponema denticola ATCC 35405

ori position (bp) ter position (bp) ori position (bp) ter position (bp)
GC-LowPass10 2842277 1640963 PURINE-LowPass10 2524425 1625695
GC-LowPass20 2842277 1640963 PURINE-LowPass20 2524425 1625695
GC-LowPass50 2842277 1640963 PURINE-LowPass50 2524425 1625695
GC-LowPass90 2842277 1640269 PURINE-LowPass90 2523731 1623613
GC-LowPass95 2842277 1635411 PURINE-LowPass95 2522343 1625695
GC-LowPass99 2827009 1645127 PURINE-LowPass99 2517485 1647209
KETO-LowPass10 366779 1585443 GC ORITER 2842846 1641036
KETO-LowPass20 366779 1585443 KETO ORITER 367151 1585638
KETO-LowPass50 366779 1585443 PURINE ORITER 2524613 1626176
KETO-LowPass90 2840889 1585443 INTER GC ORITER 2842846 1641036
KETO-LowPass95 367473 1590301 INTER KETO ORITER 367151 1585638
KETO-LowPass99 354981 1572951 INTER PURINE ORITER 2524613 1626176
NORMGC GC ORITER 2842846 1641036 CAI GC ORITER 2842846 1626388
NORMGC KETO ORITER 367151 1585638 CAI KETO ORITER 367151 1585638
NORMGC PURINE ORITER 2524613 1123037 CAI PURINE ORITER 2524613 1626176



genomicskew.png
GC skew in GC3/non-coding/whole genome
Fourier power spectrum
Fourier Power Spectrum
Fourier power spectrum (1 to 50Hz)
Fourier Power Spectrum (1 to 50Hz)

gcwin-gc-1000.png
GC Content
window: 1000 bp
gcwin-gc-5000.png
GC Content
window: 5000 bp
gcwin-gc-10000.png
GC Content
window: 10000 bp
gcwin-at-1000.png
AT Content
window: 1000 bp
gcwin-at-5000.png
AT Content
window: 5000 bp
gcwin-at-10000.png
AT Content
window: 10000 bp

gcwin-keto-1000.png
Keto Content
window: 1000 bp
gcwin-keto-5000.png
Keto Content
window: 5000 bp
gcwin-keto-10000.png
Keto Content
window: 10000 bp
gcwin-purine-1000.png
Purine Content
window: 1000 bp
gcwin-purine-5000.png
Purine Content
window: 5000 bp
gcwin-purine-10000.png
Purine Content
window: 10000 bp

gcskew-gc-1000.png
GC Skew
window: 1000 bp
gcskew-gc-5000.png
GC Skew
window: 5000 bp
gcskew-gc-10000.png
GC Skew
window: 10000 bp
gcskew-at-1000.png
AT Skew
window: 1000 bp
gcskew-at-5000.png
AT Skew
window: 5000 bp
gcskew-at-10000.png
AT Skew
window: 10000 bp

gcskew-keto-1000.png
Keto Skew
window: 1000 bp
gcskew-keto-5000.png
Keto Skew
window: 5000 bp
gcskew-keto-10000.png
Keto Skew
window: 10000 bp
gcskew-purine-1000.png
Purine Skew
window: 1000 bp
gcskew-purine-5000.png
Purine Skew
window: 5000 bp
gcskew-purine-10000.png
Purine Skew
window: 10000 bp

cum_gcskew-gc-1000.png
GC Skew(cumulative)
window: 1000 bp
cum_gcskew-gc-5000.png
GC Skew(cumulative)
window: 5000 bp
cum_gcskew-gc-10000.png
GC Skew(cumulative)
window: 10000 bp
cum_gcskew-at-1000.png
AT Skew(cumulative)
window: 1000 bp
cum_gcskew-at-5000.png
AT Skew(cumulative)
window: 5000 bp
cum_gcskew-at-10000.png
AT Skew(cumulative)
window: 10000 bp

cum_gcskew-keto-1000.png
Keto Skew(cumulative)
window: 1000 bp
cum_gcskew-keto-5000.png
Keto Skew(cumulative)
window: 5000 bp
cum_gcskew-keto-10000.png
Keto Skew(cumulative)
window: 10000 bp
cum_gcskew-purine-1000.png
Purine Skew(cumulative)
window: 1000 bp
cum_gcskew-purine-5000.png
Purine Skew(cumulative)
window: 5000 bp
cum_gcskew-purine-10000.png
Purine Skew(cumulative)
window: 10000 bp





(C) 2006 Institute for Advanced Biosciences, Keio University