NC_002940: Haemophilus ducreyi 35000HP

ori position (bp) ter position (bp) ori position (bp) ter position (bp)
GC-LowPass10 207 1194183 PURINE-LowPass10 4761 1194183
GC-LowPass20 207 1194183 PURINE-LowPass20 4761 1194183
GC-LowPass50 207 1194183 PURINE-LowPass50 4761 1194183
GC-LowPass90 207 1194183 PURINE-LowPass90 3933 1193769
GC-LowPass95 207 1192527 PURINE-LowPass95 207 1190457
GC-LowPass99 207 1195011 PURINE-LowPass99 207 1192527
KETO-LowPass10 2277 1269945 GC ORITER 315 1194656
KETO-LowPass20 1863 1268703 KETO ORITER 2361 1260760
KETO-LowPass50 1863 1268289 PURINE ORITER 4934 1194333
KETO-LowPass90 207 1268289 INTER GC ORITER 315 1194656
KETO-LowPass95 207 1259181 INTER KETO ORITER 2361 1260760
KETO-LowPass99 207 1274085 INTER PURINE ORITER 4934 1194333
NORMGC GC ORITER 315 1194656 CAI GC ORITER 315 1194656
NORMGC KETO ORITER 2361 1260760 CAI KETO ORITER 2361 1260760
NORMGC PURINE ORITER 4934 1177426 CAI PURINE ORITER 4934 1179352



genomicskew.png
GC skew in GC3/non-coding/whole genome
Fourier power spectrum
Fourier Power Spectrum
Fourier power spectrum (1 to 50Hz)
Fourier Power Spectrum (1 to 50Hz)

gcwin-gc-1000.png
GC Content
window: 1000 bp
gcwin-gc-5000.png
GC Content
window: 5000 bp
gcwin-gc-10000.png
GC Content
window: 10000 bp
gcwin-at-1000.png
AT Content
window: 1000 bp
gcwin-at-5000.png
AT Content
window: 5000 bp
gcwin-at-10000.png
AT Content
window: 10000 bp

gcwin-keto-1000.png
Keto Content
window: 1000 bp
gcwin-keto-5000.png
Keto Content
window: 5000 bp
gcwin-keto-10000.png
Keto Content
window: 10000 bp
gcwin-purine-1000.png
Purine Content
window: 1000 bp
gcwin-purine-5000.png
Purine Content
window: 5000 bp
gcwin-purine-10000.png
Purine Content
window: 10000 bp

gcskew-gc-1000.png
GC Skew
window: 1000 bp
gcskew-gc-5000.png
GC Skew
window: 5000 bp
gcskew-gc-10000.png
GC Skew
window: 10000 bp
gcskew-at-1000.png
AT Skew
window: 1000 bp
gcskew-at-5000.png
AT Skew
window: 5000 bp
gcskew-at-10000.png
AT Skew
window: 10000 bp

gcskew-keto-1000.png
Keto Skew
window: 1000 bp
gcskew-keto-5000.png
Keto Skew
window: 5000 bp
gcskew-keto-10000.png
Keto Skew
window: 10000 bp
gcskew-purine-1000.png
Purine Skew
window: 1000 bp
gcskew-purine-5000.png
Purine Skew
window: 5000 bp
gcskew-purine-10000.png
Purine Skew
window: 10000 bp

cum_gcskew-gc-1000.png
GC Skew(cumulative)
window: 1000 bp
cum_gcskew-gc-5000.png
GC Skew(cumulative)
window: 5000 bp
cum_gcskew-gc-10000.png
GC Skew(cumulative)
window: 10000 bp
cum_gcskew-at-1000.png
AT Skew(cumulative)
window: 1000 bp
cum_gcskew-at-5000.png
AT Skew(cumulative)
window: 5000 bp
cum_gcskew-at-10000.png
AT Skew(cumulative)
window: 10000 bp

cum_gcskew-keto-1000.png
Keto Skew(cumulative)
window: 1000 bp
cum_gcskew-keto-5000.png
Keto Skew(cumulative)
window: 5000 bp
cum_gcskew-keto-10000.png
Keto Skew(cumulative)
window: 10000 bp
cum_gcskew-purine-1000.png
Purine Skew(cumulative)
window: 1000 bp
cum_gcskew-purine-5000.png
Purine Skew(cumulative)
window: 5000 bp
cum_gcskew-purine-10000.png
Purine Skew(cumulative)
window: 10000 bp





(C) 2006 Institute for Advanced Biosciences, Keio University