NC_002928: Bordetella parapertussis 12822

ori position (bp) ter position (bp) ori position (bp) ter position (bp)
GC-LowPass10 2913 2899103 PURINE-LowPass10 583 2906093
GC-LowPass20 1748 2899103 PURINE-LowPass20 583 2906093
GC-LowPass50 1748 2899103 PURINE-LowPass50 583 2906093
GC-LowPass90 583 2895608 PURINE-LowPass90 583 2902598
GC-LowPass95 583 2892113 PURINE-LowPass95 583 2900268
GC-LowPass99 9903 2874638 PURINE-LowPass99 583 2888618
KETO-LowPass10 39028 2867648 GC ORITER 3260 2899751
KETO-LowPass20 39028 2867648 KETO ORITER 38943 2867695
KETO-LowPass50 39028 2868813 PURINE ORITER 1110 2907119
KETO-LowPass90 43688 2871143 INTER GC ORITER 3260 2899751
KETO-LowPass95 37863 2881628 INTER KETO ORITER 38943 2867695
KETO-LowPass99 21553 2859493 INTER PURINE ORITER 1110 2907119
NORMGC GC ORITER 3260 2899751 CAI GC ORITER 3260 2899751
NORMGC KETO ORITER 38943 2867695 CAI KETO ORITER 20143 2867695
NORMGC PURINE ORITER 1110 2907119 CAI PURINE ORITER 3260 2895956



genomicskew.png
GC skew in GC3/non-coding/whole genome
Fourier power spectrum
Fourier Power Spectrum
Fourier power spectrum (1 to 50Hz)
Fourier Power Spectrum (1 to 50Hz)

gcwin-gc-1000.png
GC Content
window: 1000 bp
gcwin-gc-5000.png
GC Content
window: 5000 bp
gcwin-gc-10000.png
GC Content
window: 10000 bp
gcwin-at-1000.png
AT Content
window: 1000 bp
gcwin-at-5000.png
AT Content
window: 5000 bp
gcwin-at-10000.png
AT Content
window: 10000 bp

gcwin-keto-1000.png
Keto Content
window: 1000 bp
gcwin-keto-5000.png
Keto Content
window: 5000 bp
gcwin-keto-10000.png
Keto Content
window: 10000 bp
gcwin-purine-1000.png
Purine Content
window: 1000 bp
gcwin-purine-5000.png
Purine Content
window: 5000 bp
gcwin-purine-10000.png
Purine Content
window: 10000 bp

gcskew-gc-1000.png
GC Skew
window: 1000 bp
gcskew-gc-5000.png
GC Skew
window: 5000 bp
gcskew-gc-10000.png
GC Skew
window: 10000 bp
gcskew-at-1000.png
AT Skew
window: 1000 bp
gcskew-at-5000.png
AT Skew
window: 5000 bp
gcskew-at-10000.png
AT Skew
window: 10000 bp

gcskew-keto-1000.png
Keto Skew
window: 1000 bp
gcskew-keto-5000.png
Keto Skew
window: 5000 bp
gcskew-keto-10000.png
Keto Skew
window: 10000 bp
gcskew-purine-1000.png
Purine Skew
window: 1000 bp
gcskew-purine-5000.png
Purine Skew
window: 5000 bp
gcskew-purine-10000.png
Purine Skew
window: 10000 bp

cum_gcskew-gc-1000.png
GC Skew(cumulative)
window: 1000 bp
cum_gcskew-gc-5000.png
GC Skew(cumulative)
window: 5000 bp
cum_gcskew-gc-10000.png
GC Skew(cumulative)
window: 10000 bp
cum_gcskew-at-1000.png
AT Skew(cumulative)
window: 1000 bp
cum_gcskew-at-5000.png
AT Skew(cumulative)
window: 5000 bp
cum_gcskew-at-10000.png
AT Skew(cumulative)
window: 10000 bp

cum_gcskew-keto-1000.png
Keto Skew(cumulative)
window: 1000 bp
cum_gcskew-keto-5000.png
Keto Skew(cumulative)
window: 5000 bp
cum_gcskew-keto-10000.png
Keto Skew(cumulative)
window: 10000 bp
cum_gcskew-purine-1000.png
Purine Skew(cumulative)
window: 1000 bp
cum_gcskew-purine-5000.png
Purine Skew(cumulative)
window: 5000 bp
cum_gcskew-purine-10000.png
Purine Skew(cumulative)
window: 10000 bp





(C) 2006 Institute for Advanced Biosciences, Keio University