NC_002737: Streptococcus pyogenes M1 GAS

ori position (bp) ter position (bp) ori position (bp) ter position (bp)
GC-LowPass10 2034 978354 PURINE-LowPass10 226 978354
GC-LowPass20 2034 978354 PURINE-LowPass20 678 978354
GC-LowPass50 2034 978354 PURINE-LowPass50 226 978354
GC-LowPass90 678 978354 PURINE-LowPass90 226 978806
GC-LowPass95 226 974738 PURINE-LowPass95 226 977902
GC-LowPass99 226 971122 PURINE-LowPass99 226 978806
KETO-LowPass10 12882 969314 GC ORITER 2898 978864
KETO-LowPass20 12430 969314 KETO ORITER 12349 963377
KETO-LowPass50 12430 969314 PURINE ORITER 38 978516
KETO-LowPass90 11526 965246 INTER GC ORITER 2898 978864
KETO-LowPass95 10622 966602 INTER KETO ORITER 12349 963377
KETO-LowPass99 678 963890 INTER PURINE ORITER 38 978516
NORMGC GC ORITER 2898 978864 CAI GC ORITER 2898 978864
NORMGC KETO ORITER 1852435 963377 CAI KETO ORITER 12349 951150
NORMGC PURINE ORITER 38 978516 CAI PURINE ORITER 38 978516



genomicskew.png
GC skew in GC3/non-coding/whole genome
Fourier power spectrum
Fourier Power Spectrum
Fourier power spectrum (1 to 50Hz)
Fourier Power Spectrum (1 to 50Hz)

gcwin-gc-1000.png
GC Content
window: 1000 bp
gcwin-gc-5000.png
GC Content
window: 5000 bp
gcwin-gc-10000.png
GC Content
window: 10000 bp
gcwin-at-1000.png
AT Content
window: 1000 bp
gcwin-at-5000.png
AT Content
window: 5000 bp
gcwin-at-10000.png
AT Content
window: 10000 bp

gcwin-keto-1000.png
Keto Content
window: 1000 bp
gcwin-keto-5000.png
Keto Content
window: 5000 bp
gcwin-keto-10000.png
Keto Content
window: 10000 bp
gcwin-purine-1000.png
Purine Content
window: 1000 bp
gcwin-purine-5000.png
Purine Content
window: 5000 bp
gcwin-purine-10000.png
Purine Content
window: 10000 bp

gcskew-gc-1000.png
GC Skew
window: 1000 bp
gcskew-gc-5000.png
GC Skew
window: 5000 bp
gcskew-gc-10000.png
GC Skew
window: 10000 bp
gcskew-at-1000.png
AT Skew
window: 1000 bp
gcskew-at-5000.png
AT Skew
window: 5000 bp
gcskew-at-10000.png
AT Skew
window: 10000 bp

gcskew-keto-1000.png
Keto Skew
window: 1000 bp
gcskew-keto-5000.png
Keto Skew
window: 5000 bp
gcskew-keto-10000.png
Keto Skew
window: 10000 bp
gcskew-purine-1000.png
Purine Skew
window: 1000 bp
gcskew-purine-5000.png
Purine Skew
window: 5000 bp
gcskew-purine-10000.png
Purine Skew
window: 10000 bp

cum_gcskew-gc-1000.png
GC Skew(cumulative)
window: 1000 bp
cum_gcskew-gc-5000.png
GC Skew(cumulative)
window: 5000 bp
cum_gcskew-gc-10000.png
GC Skew(cumulative)
window: 10000 bp
cum_gcskew-at-1000.png
AT Skew(cumulative)
window: 1000 bp
cum_gcskew-at-5000.png
AT Skew(cumulative)
window: 5000 bp
cum_gcskew-at-10000.png
AT Skew(cumulative)
window: 10000 bp

cum_gcskew-keto-1000.png
Keto Skew(cumulative)
window: 1000 bp
cum_gcskew-keto-5000.png
Keto Skew(cumulative)
window: 5000 bp
cum_gcskew-keto-10000.png
Keto Skew(cumulative)
window: 10000 bp
cum_gcskew-purine-1000.png
Purine Skew(cumulative)
window: 1000 bp
cum_gcskew-purine-5000.png
Purine Skew(cumulative)
window: 5000 bp
cum_gcskew-purine-10000.png
Purine Skew(cumulative)
window: 10000 bp





(C) 2006 Institute for Advanced Biosciences, Keio University