NC_002655: Escherichia coli O157:H7 EDL933

ori position (bp) ter position (bp) ori position (bp) ter position (bp)
GC-LowPass10 4788276 2013383 PURINE-LowPass10 4795021 2014732
GC-LowPass20 4788276 2013383 PURINE-LowPass20 4795021 2013383
GC-LowPass50 4785578 2014732 PURINE-LowPass50 4795021 2014732
GC-LowPass90 4790974 2010685 PURINE-LowPass90 4792323 2009336
GC-LowPass95 4786927 2002591 PURINE-LowPass95 4786927 2005289
GC-LowPass99 4790974 2001242 PURINE-LowPass99 4820652 2005289
KETO-LowPass10 4785578 1974262 GC ORITER 4788024 2014840
KETO-LowPass20 4785578 1974262 KETO ORITER 4785986 1974740
KETO-LowPass50 4785578 1974262 PURINE ORITER 4795727 2014880
KETO-LowPass90 4785578 1981007 INTER GC ORITER 4788024 2014840
KETO-LowPass95 4784229 1971564 INTER KETO ORITER 4785986 1974740
KETO-LowPass99 4768041 2001242 INTER PURINE ORITER 4795727 2014880
NORMGC GC ORITER 4788024 2014840 CAI GC ORITER 4788024 2014405
NORMGC KETO ORITER 4785986 2055000 CAI KETO ORITER 4785986 2055000
NORMGC PURINE ORITER 4795727 2014880 CAI PURINE ORITER 4795727 2014388



genomicskew.png
GC skew in GC3/non-coding/whole genome
Fourier power spectrum
Fourier Power Spectrum
Fourier power spectrum (1 to 50Hz)
Fourier Power Spectrum (1 to 50Hz)

gcwin-gc-1000.png
GC Content
window: 1000 bp
gcwin-gc-5000.png
GC Content
window: 5000 bp
gcwin-gc-10000.png
GC Content
window: 10000 bp
gcwin-at-1000.png
AT Content
window: 1000 bp
gcwin-at-5000.png
AT Content
window: 5000 bp
gcwin-at-10000.png
AT Content
window: 10000 bp

gcwin-keto-1000.png
Keto Content
window: 1000 bp
gcwin-keto-5000.png
Keto Content
window: 5000 bp
gcwin-keto-10000.png
Keto Content
window: 10000 bp
gcwin-purine-1000.png
Purine Content
window: 1000 bp
gcwin-purine-5000.png
Purine Content
window: 5000 bp
gcwin-purine-10000.png
Purine Content
window: 10000 bp

gcskew-gc-1000.png
GC Skew
window: 1000 bp
gcskew-gc-5000.png
GC Skew
window: 5000 bp
gcskew-gc-10000.png
GC Skew
window: 10000 bp
gcskew-at-1000.png
AT Skew
window: 1000 bp
gcskew-at-5000.png
AT Skew
window: 5000 bp
gcskew-at-10000.png
AT Skew
window: 10000 bp

gcskew-keto-1000.png
Keto Skew
window: 1000 bp
gcskew-keto-5000.png
Keto Skew
window: 5000 bp
gcskew-keto-10000.png
Keto Skew
window: 10000 bp
gcskew-purine-1000.png
Purine Skew
window: 1000 bp
gcskew-purine-5000.png
Purine Skew
window: 5000 bp
gcskew-purine-10000.png
Purine Skew
window: 10000 bp

cum_gcskew-gc-1000.png
GC Skew(cumulative)
window: 1000 bp
cum_gcskew-gc-5000.png
GC Skew(cumulative)
window: 5000 bp
cum_gcskew-gc-10000.png
GC Skew(cumulative)
window: 10000 bp
cum_gcskew-at-1000.png
AT Skew(cumulative)
window: 1000 bp
cum_gcskew-at-5000.png
AT Skew(cumulative)
window: 5000 bp
cum_gcskew-at-10000.png
AT Skew(cumulative)
window: 10000 bp

cum_gcskew-keto-1000.png
Keto Skew(cumulative)
window: 1000 bp
cum_gcskew-keto-5000.png
Keto Skew(cumulative)
window: 5000 bp
cum_gcskew-keto-10000.png
Keto Skew(cumulative)
window: 10000 bp
cum_gcskew-purine-1000.png
Purine Skew(cumulative)
window: 1000 bp
cum_gcskew-purine-5000.png
Purine Skew(cumulative)
window: 5000 bp
cum_gcskew-purine-10000.png
Purine Skew(cumulative)
window: 10000 bp





(C) 2006 Institute for Advanced Biosciences, Keio University