NC_002516: Pseudomonas aeruginosa PAO1

ori position (bp) ter position (bp) ori position (bp) ter position (bp)
GC-LowPass10 6242143 2428817 PURINE-LowPass10 6257433 2444107
GC-LowPass20 6242143 2428817 PURINE-LowPass20 6257433 2445636
GC-LowPass50 6243672 2427288 PURINE-LowPass50 6254375 2444107
GC-LowPass90 6243672 2434933 PURINE-LowPass90 6262020 2441049
GC-LowPass95 6245201 2424230 PURINE-LowPass95 6262020 2433404
GC-LowPass99 6240614 2404353 PURINE-LowPass99 6225324 2434933
KETO-LowPass10 6237556 2332490 GC ORITER 6242445 2428798
KETO-LowPass20 6237556 2332490 KETO ORITER 6241891 2333873
KETO-LowPass50 6240614 2332490 PURINE ORITER 6253077 2445255
KETO-LowPass90 6242143 2334019 INTER GC ORITER 6242445 2428798
KETO-LowPass95 6240614 2334019 INTER KETO ORITER 6241891 2333873
KETO-LowPass99 6258962 2389063 INTER PURINE ORITER 6253077 2445255
NORMGC GC ORITER 6242445 2428798 CAI GC ORITER 6242445 2428798
NORMGC KETO ORITER 6241891 2333873 CAI KETO ORITER 6241891 2333873
NORMGC PURINE ORITER 6258091 2428866 CAI PURINE ORITER 6258091 2428866



genomicskew.png
GC skew in GC3/non-coding/whole genome
Fourier power spectrum
Fourier Power Spectrum
Fourier power spectrum (1 to 50Hz)
Fourier Power Spectrum (1 to 50Hz)

gcwin-gc-1000.png
GC Content
window: 1000 bp
gcwin-gc-5000.png
GC Content
window: 5000 bp
gcwin-gc-10000.png
GC Content
window: 10000 bp
gcwin-at-1000.png
AT Content
window: 1000 bp
gcwin-at-5000.png
AT Content
window: 5000 bp
gcwin-at-10000.png
AT Content
window: 10000 bp

gcwin-keto-1000.png
Keto Content
window: 1000 bp
gcwin-keto-5000.png
Keto Content
window: 5000 bp
gcwin-keto-10000.png
Keto Content
window: 10000 bp
gcwin-purine-1000.png
Purine Content
window: 1000 bp
gcwin-purine-5000.png
Purine Content
window: 5000 bp
gcwin-purine-10000.png
Purine Content
window: 10000 bp

gcskew-gc-1000.png
GC Skew
window: 1000 bp
gcskew-gc-5000.png
GC Skew
window: 5000 bp
gcskew-gc-10000.png
GC Skew
window: 10000 bp
gcskew-at-1000.png
AT Skew
window: 1000 bp
gcskew-at-5000.png
AT Skew
window: 5000 bp
gcskew-at-10000.png
AT Skew
window: 10000 bp

gcskew-keto-1000.png
Keto Skew
window: 1000 bp
gcskew-keto-5000.png
Keto Skew
window: 5000 bp
gcskew-keto-10000.png
Keto Skew
window: 10000 bp
gcskew-purine-1000.png
Purine Skew
window: 1000 bp
gcskew-purine-5000.png
Purine Skew
window: 5000 bp
gcskew-purine-10000.png
Purine Skew
window: 10000 bp

cum_gcskew-gc-1000.png
GC Skew(cumulative)
window: 1000 bp
cum_gcskew-gc-5000.png
GC Skew(cumulative)
window: 5000 bp
cum_gcskew-gc-10000.png
GC Skew(cumulative)
window: 10000 bp
cum_gcskew-at-1000.png
AT Skew(cumulative)
window: 1000 bp
cum_gcskew-at-5000.png
AT Skew(cumulative)
window: 5000 bp
cum_gcskew-at-10000.png
AT Skew(cumulative)
window: 10000 bp

cum_gcskew-keto-1000.png
Keto Skew(cumulative)
window: 1000 bp
cum_gcskew-keto-5000.png
Keto Skew(cumulative)
window: 5000 bp
cum_gcskew-keto-10000.png
Keto Skew(cumulative)
window: 10000 bp
cum_gcskew-purine-1000.png
Purine Skew(cumulative)
window: 1000 bp
cum_gcskew-purine-5000.png
Purine Skew(cumulative)
window: 5000 bp
cum_gcskew-purine-10000.png
Purine Skew(cumulative)
window: 10000 bp





(C) 2006 Institute for Advanced Biosciences, Keio University