NC_000854: Aeropyrum pernix K1

ori position (bp) ter position (bp) ori position (bp) ter position (bp)
GC-LowPass10 1386039 113350 PURINE-LowPass10 1510174 155271
GC-LowPass20 1386039 113350 PURINE-LowPass20 1510174 155271
GC-LowPass50 1386446 113350 PURINE-LowPass50 1510174 155678
GC-LowPass90 1384004 113350 PURINE-LowPass90 1510988 154457
GC-LowPass95 1384411 113350 PURINE-LowPass95 1510174 147945
GC-LowPass99 1391330 135735 PURINE-LowPass99 1492266 146317
KETO-LowPass10 398250 1012820 GC ORITER 1386124 113617
KETO-LowPass20 397436 1012820 KETO ORITER 397513 1012843
KETO-LowPass50 397843 1012820 PURINE ORITER 1510522 155749
KETO-LowPass90 397436 1012006 INTER GC ORITER 1386124 113617
KETO-LowPass95 399471 1014041 INTER KETO ORITER 397513 1012843
KETO-LowPass99 393366 886243 INTER PURINE ORITER 1510522 155749
NORMGC GC ORITER 1386124 113617 CAI GC ORITER 1386124 121857
NORMGC KETO ORITER 397513 1012843 CAI KETO ORITER 397513 1012843
NORMGC PURINE ORITER 1510522 155749 CAI PURINE ORITER 1510522 155749



genomicskew.png
GC skew in GC3/non-coding/whole genome
Fourier power spectrum
Fourier Power Spectrum
Fourier power spectrum (1 to 50Hz)
Fourier Power Spectrum (1 to 50Hz)

gcwin-gc-1000.png
GC Content
window: 1000 bp
gcwin-gc-5000.png
GC Content
window: 5000 bp
gcwin-gc-10000.png
GC Content
window: 10000 bp
gcwin-at-1000.png
AT Content
window: 1000 bp
gcwin-at-5000.png
AT Content
window: 5000 bp
gcwin-at-10000.png
AT Content
window: 10000 bp

gcwin-keto-1000.png
Keto Content
window: 1000 bp
gcwin-keto-5000.png
Keto Content
window: 5000 bp
gcwin-keto-10000.png
Keto Content
window: 10000 bp
gcwin-purine-1000.png
Purine Content
window: 1000 bp
gcwin-purine-5000.png
Purine Content
window: 5000 bp
gcwin-purine-10000.png
Purine Content
window: 10000 bp

gcskew-gc-1000.png
GC Skew
window: 1000 bp
gcskew-gc-5000.png
GC Skew
window: 5000 bp
gcskew-gc-10000.png
GC Skew
window: 10000 bp
gcskew-at-1000.png
AT Skew
window: 1000 bp
gcskew-at-5000.png
AT Skew
window: 5000 bp
gcskew-at-10000.png
AT Skew
window: 10000 bp

gcskew-keto-1000.png
Keto Skew
window: 1000 bp
gcskew-keto-5000.png
Keto Skew
window: 5000 bp
gcskew-keto-10000.png
Keto Skew
window: 10000 bp
gcskew-purine-1000.png
Purine Skew
window: 1000 bp
gcskew-purine-5000.png
Purine Skew
window: 5000 bp
gcskew-purine-10000.png
Purine Skew
window: 10000 bp

cum_gcskew-gc-1000.png
GC Skew(cumulative)
window: 1000 bp
cum_gcskew-gc-5000.png
GC Skew(cumulative)
window: 5000 bp
cum_gcskew-gc-10000.png
GC Skew(cumulative)
window: 10000 bp
cum_gcskew-at-1000.png
AT Skew(cumulative)
window: 1000 bp
cum_gcskew-at-5000.png
AT Skew(cumulative)
window: 5000 bp
cum_gcskew-at-10000.png
AT Skew(cumulative)
window: 10000 bp

cum_gcskew-keto-1000.png
Keto Skew(cumulative)
window: 1000 bp
cum_gcskew-keto-5000.png
Keto Skew(cumulative)
window: 5000 bp
cum_gcskew-keto-10000.png
Keto Skew(cumulative)
window: 10000 bp
cum_gcskew-purine-1000.png
Purine Skew(cumulative)
window: 1000 bp
cum_gcskew-purine-5000.png
Purine Skew(cumulative)
window: 5000 bp
cum_gcskew-purine-10000.png
Purine Skew(cumulative)
window: 10000 bp





(C) 2006 Institute for Advanced Biosciences, Keio University