Table of Contents
GenomeProjector Documents
Views
Setting up you own Genome Projector
Development API
Other Documents
GenomeProjector Documents
Quick Usage
Searching Genome Projector
Views
Circular Genome Map View
Overview
Displayed Objects
genes
tRNAs and rRNAs
GC content and GC skew
replication origin and terminus
Displayed Annotations
Genome Map View
Overview
Displayed Objects
genes
Nucleotide Content
Overlay: gene expression level
Displayed Annotations
Biochemical Pathway Map View
Overview
Displayed Objects
Overlay: organism-specific pathway
Displayed Annotations
Acknowledgements
DNA Walk Map View
Overview
Displayed Objects
DNA Walk
GC skew and DNA Walk
Displayed Annotations
Setting up you own Genome Projector
Installation
Development API
Installation of G-language Genome Analysis Environment
(G-language System v.1.8.3 or above is necessary for creating your own Genome Projector maps)
Generating custom zoomable maps from any image file
Step 0: Installing G-language Genome Analysis Environment
Step 1: Creating custom zoomable map from your image
Step 2: Customizing the zoom level
Step 3: Publishing your zoomable map on your web server
Generating Genome Projector Views from your genome files
Generating Circular Genome Map View
Generating Genome Map View
Generating DNA Walk Map View
Integrating generated maps to Genome Projector
Using custom database for searching
How the annotations are stored
Adding custom annotation to your maps with GFF
Modifying displayed annotations
Mapping data on Genome Projector
adding_overlays
creating_overlays
Other Documents
Media Attentions