====== GenomeProjector Documents ====== * [[http://www.g-language.org/GenomeProjector/help.html|Quick Usage]] * [[Searching Genome Projector]] ===== Views ===== * [[Circular Genome Map View]] *[[Circular Genome Map View#overview|Overview]] *[[Circular Genome Map View#displayed_objects|Displayed Objects]] *[[Circular Genome Map View#genes|genes]] *[[Circular Genome Map View#trnas_and_rrnas|tRNAs and rRNAs]] *[[Circular Genome Map View#gc_content_and_gc_skew|GC content and GC skew]] *[[Circular Genome Map View#replication_origin_and_terminus|replication origin and terminus]] *[[Circular Genome Map View#displayed_annotations|Displayed Annotations]] * [[Genome Map View]] *[[Genome Map View#overview|Overview]] *[[Genome Map View#displayed_objects|Displayed Objects]] *[[Genome Map View#genes|genes]] *[[Genome Map View#nucleotide_content|Nucleotide Content]] *[[Genome Map View#overlaygene_expression_level|Overlay: gene expression level]] *[[Genome Map View#displayed_annotations|Displayed Annotations]] * [[Biochemical Pathway Map View]] *[[Biochemical Pathway Map View#overview|Overview]] *[[Biochemical Pathway Map View#displayed_objects|Displayed Objects]] *[[Biochemical Pathway Map View#overlayorganism-specific_pathway|Overlay: organism-specific pathway]] *[[Biochemical Pathway Map View#displayed_annotations|Displayed Annotations]] *[[Biochemical Pathway Map View#acknowledgements|Acknowledgements]] * [[DNA Walk Map View]] *[[DNA Walk Map View#overview|Overview]] *[[DNA Walk Map View#displayed_objects|Displayed Objects]] *[[DNA Walk Map View#dna_walk|DNA Walk]] *[[DNA Walk Map View#gc_skew_and_dna_walk|GC skew and DNA Walk]] *[[DNA Walk Map View#displayed_annotations|Displayed Annotations]] ===== Setting up you own Genome Projector ===== * [[Installation]] ===== Development API ===== * [[http://www.g-language.org/wiki/software|Installation of G-language Genome Analysis Environment]] (G-language System v.1.8.3 or above is necessary for creating your own Genome Projector maps) * [[Generating custom zoomable maps from any image file]] * [[Generating custom zoomable maps from any image file#step_0installing_g-language_genome_analysis_environment|Step 0: Installing G-language Genome Analysis Environment]] * [[Generating custom zoomable maps from any image file#step_1creating_custom_zoomable_map_from_your_image|Step 1: Creating custom zoomable map from your image]] * [[Generating custom zoomable maps from any image file#step_2customizing_the_zoom_level| Step 2: Customizing the zoom level]] * [[Generating custom zoomable maps from any image file#step_3publishing_your_zoomable_map_on_your_web_server|Step 3: Publishing your zoomable map on your web server]] * [[Generating Genome Projector Views from your genome files]] * [[Generating Genome Projector Views from your genome files#generating_circular_genome_map_view|Generating Circular Genome Map View]] * [[Generating Genome Projector Views from your genome files#generating_genome_map_view|Generating Genome Map View]] * [[Generating Genome Projector Views from your genome files#generating_dna_walk_map_view|Generating DNA Walk Map View]] * [[Generating Genome Projector Views from your genome files#integrating_generated_maps_to_genome_projector|Integrating generated maps to Genome Projector]] * [[Using custom database for searching]] * [[Using custom database for searching#how_the_annotations_are_stored|How the annotations are stored]] * [[Using custom database for searching#adding_custom_annotation_to_your_maps_with_gff|Adding custom annotation to your maps with GFF]] * [[Using custom database for searching#modifying_displayed_annotations|Modifying displayed annotations]] * [[Mapping data on Genome Projector]] * [[Mapping data on Genome Projector#adding_overlays]] * [[Mapping data on Genome Projector#creating_overlays]] ===== Other Documents ===== * [[media|Media Attentions]]